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The map label for this gene is cvpA [H]

Identifier: 238920603

GI number: 238920603

Start: 2608527

End: 2609132

Strand: Reverse

Name: cvpA [H]

Synonym: NT01EI_2715

Alternate gene names: 238920603

Gene position: 2609132-2608527 (Counterclockwise)

Preceding gene: 238920604

Following gene: 238920602

Centisome position: 68.44

GC content: 56.27

Gene sequence:

>606_bases
ATGGCGCACGGCGGAAATCTGCTGCGCAACCGTTTTCTTTTTCTGTTAGAATGCGCCGCGGGCGACATCTGCGGCAGTTC
ATGCATTGGAATTGTCATGGTTTGGATTGATTGGGTCATTATTGGCATCGTCGGATTTTCTGCACTGGTCAGCTTAATCC
GGGGCTTTGTGCGCGAGGCGCTGTCGCTGGTTACCTGGGGAGCGGCGTTCTTTGTCGCCAGCCATTTTTATCCCTACCTG
GCTGCCTTCTTTACCCGCTTTGAGGATGCACTGGTGCGTAATGGCATTGCGATAGCGGTGCTGTTTGTTGCGACCCTGAT
CGTCGGCGCCATCGTTAACTATGTGATCGGCACCCTGGTGGAGCGTACCGGACTGAGCGGTACGGATCGGGTGCTGGGCG
TCTGCTTTGGCGCCATACGCGGTATCCTGATCGTCGCCGCGTTGCTGTTCTTTATGGACACCTTCACGGCGATGGCGCAA
AGCGAGGAGTGGAAGCAATCCCGGCTGATCCCGCAGTTTAGCCCTATCATCAGGTGGTCATTTGACTATCTGCAAAGCAC
GTCGAGTTTCTTGCCGGAGCACATGCCGTCGCTGCCGCTCCGGTAA

Upstream 100 bases:

>100_bases
GCGCTAAGCCGCGCGTAACGGTGTTCGACGGCGCTGTTCGCTGCGGCGGGCGGCGCCATTTTTTTGGTGAAAACGGACGG
TCGGTGCGACATATTTATTT

Downstream 100 bases:

>100_bases
CGCTGATGAGGAAATGACAACATGTGCGGTATTGTCGGTATCGCCGGTTTTACACCGGTAAACCAGTCTATCTATGATGC
TCTGACGGTGTTGCAGCACC

Product: CvpA family protein

Products: NA

Alternate protein names: Protein dedE; Pur regulon 18 kDa protein [H]

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MAHGGNLLRNRFLFLLECAAGDICGSSCIGIVMVWIDWVIIGIVGFSALVSLIRGFVREALSLVTWGAAFFVASHFYPYL
AAFFTRFEDALVRNGIAIAVLFVATLIVGAIVNYVIGTLVERTGLSGTDRVLGVCFGAIRGILIVAALLFFMDTFTAMAQ
SEEWKQSRLIPQFSPIIRWSFDYLQSTSSFLPEHMPSLPLR

Sequences:

>Translated_201_residues
MAHGGNLLRNRFLFLLECAAGDICGSSCIGIVMVWIDWVIIGIVGFSALVSLIRGFVREALSLVTWGAAFFVASHFYPYL
AAFFTRFEDALVRNGIAIAVLFVATLIVGAIVNYVIGTLVERTGLSGTDRVLGVCFGAIRGILIVAALLFFMDTFTAMAQ
SEEWKQSRLIPQFSPIIRWSFDYLQSTSSFLPEHMPSLPLR
>Mature_200_residues
AHGGNLLRNRFLFLLECAAGDICGSSCIGIVMVWIDWVIIGIVGFSALVSLIRGFVREALSLVTWGAAFFVASHFYPYLA
AFFTRFEDALVRNGIAIAVLFVATLIVGAIVNYVIGTLVERTGLSGTDRVLGVCFGAIRGILIVAALLFFMDTFTAMAQS
EEWKQSRLIPQFSPIIRWSFDYLQSTSSFLPEHMPSLPLR

Specific function: Required for colicin V production from plasmid IncFI ColV3-K30 [H]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788652, Length=161, Percent_Identity=77.0186335403727, Blast_Score=253, Evalue=6e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 22137; Mature: 22006

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHGGNLLRNRFLFLLECAAGDICGSSCIGIVMVWIDWVIIGIVGFSALVSLIRGFVREA
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLVTWGAAFFVASHFYPYLAAFFTRFEDALVRNGIAIAVLFVATLIVGAIVNYVIGTLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ERTGLSGTDRVLGVCFGAIRGILIVAALLFFMDTFTAMAQSEEWKQSRLIPQFSPIIRWS
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FDYLQSTSSFLPEHMPSLPLR
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AHGGNLLRNRFLFLLECAAGDICGSSCIGIVMVWIDWVIIGIVGFSALVSLIRGFVREA
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLVTWGAAFFVASHFYPYLAAFFTRFEDALVRNGIAIAVLFVATLIVGAIVNYVIGTLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ERTGLSGTDRVLGVCFGAIRGILIVAALLFFMDTFTAMAQSEEWKQSRLIPQFSPIIRWS
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FDYLQSTSSFLPEHMPSLPLR
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3040734; 2991286; 9205837; 9278503; 2542219 [H]