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The map label for this gene is yfcH [H]

Identifier: 238920599

GI number: 238920599

Start: 2604513

End: 2605409

Strand: Direct

Name: yfcH [H]

Synonym: NT01EI_2711

Alternate gene names: 238920599

Gene position: 2604513-2605409 (Clockwise)

Preceding gene: 238920598

Following gene: 238920600

Centisome position: 68.32

GC content: 63.43

Gene sequence:

>897_bases
ATGGAGATCTTGATTACCGGTGCTACCGGTCTTATCGGTCAGGCGCTGTGCGCCCGGCTACACGTGCTCGGCCATCGACT
GAACGTGCTGACGCGCAGCGCAGCGCGGGCCCGTCAGCGTATAGGGAACAGCGTTCAGTGCCTCACCTCACTCGATAATC
TGACCAGTCTGGATGGCTATGACGCCGTCATTAATCTGGCCGGTGAACCGATCGCCGACAAACGCTGGAGCGCGGCGCAA
AAGCAGGTACTGTGCGACAGTCGCTGGACAGTCACCCAGCGTCTGGCCAACCTGATCCGCGCCGGACAGCGCCCGCCCCA
CGTGCTGATCTCCGGCTCCGCCGTCGGTTACTACGGCAGTCAGGATGAGACGCCGCTCAACGAGGATGACCCGCCCCGCA
ATGACTTCACCCACCGCCTGTGCGCCCGCTGGGAGGCGCTGGCGTATGAGGCGGAGAGCGAATATACCCGCGTCTGCCTG
CTGCGTACCGGCATCGTACTGGCTCCCAACGGCGGCGCGCTGGGACGTATGCTGCCGCTGTTTCGCCTGGGGCTCGGCGG
CGAATTGGGCAATGGCCACCAGTACATGTCCTGGATCCATATCGACGACATGGTCAACGCAATACTGTATCTGCTGGATA
ACCCTACTCTGCGCGGCCCCTTTAACATGACAGCCCCCTACCCGGTGCGCAACGATCAGTTCGTCGCCACGCTGGGCGAG
GTGCTGGGGCGGCCTACCCTGCTCCGCGTACCTGCCATGGCCCTACGCGCGTTAATGGGTGAGGCCAGTCAGATCCTGCT
GGGCGGCCAGCGGGTACTGCCGCGCCATCTGGAGGAAGCGGGCTTTGGCTTTCGCTATTACGACCTGCGCGAGGCGCTGG
ACGACATCATCAGATAG

Upstream 100 bases:

>100_bases
GCCCTACGCTATGCCGATTCGGTCTCCGTGACCATGCGCTATAGCCGGGGGGAATAAGCGGAGGGAACGGTGCGTCGGCG
CGCGCCGTAAGGAGCAGCCT

Downstream 100 bases:

>100_bases
CGTGGAGCGCACGCAATGTGCAGCCCGGCGCACCGGCGGTGACGGTGTGACCCGACGCGCCCACTACACTCTCTGCAGAG
AGAAGCGATGGTACCGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MEILITGATGLIGQALCARLHVLGHRLNVLTRSAARARQRIGNSVQCLTSLDNLTSLDGYDAVINLAGEPIADKRWSAAQ
KQVLCDSRWTVTQRLANLIRAGQRPPHVLISGSAVGYYGSQDETPLNEDDPPRNDFTHRLCARWEALAYEAESEYTRVCL
LRTGIVLAPNGGALGRMLPLFRLGLGGELGNGHQYMSWIHIDDMVNAILYLLDNPTLRGPFNMTAPYPVRNDQFVATLGE
VLGRPTLLRVPAMALRALMGEASQILLGGQRVLPRHLEEAGFGFRYYDLREALDDIIR

Sequences:

>Translated_298_residues
MEILITGATGLIGQALCARLHVLGHRLNVLTRSAARARQRIGNSVQCLTSLDNLTSLDGYDAVINLAGEPIADKRWSAAQ
KQVLCDSRWTVTQRLANLIRAGQRPPHVLISGSAVGYYGSQDETPLNEDDPPRNDFTHRLCARWEALAYEAESEYTRVCL
LRTGIVLAPNGGALGRMLPLFRLGLGGELGNGHQYMSWIHIDDMVNAILYLLDNPTLRGPFNMTAPYPVRNDQFVATLGE
VLGRPTLLRVPAMALRALMGEASQILLGGQRVLPRHLEEAGFGFRYYDLREALDDIIR
>Mature_298_residues
MEILITGATGLIGQALCARLHVLGHRLNVLTRSAARARQRIGNSVQCLTSLDNLTSLDGYDAVINLAGEPIADKRWSAAQ
KQVLCDSRWTVTQRLANLIRAGQRPPHVLISGSAVGYYGSQDETPLNEDDPPRNDFTHRLCARWEALAYEAESEYTRVCL
LRTGIVLAPNGGALGRMLPLFRLGLGGELGNGHQYMSWIHIDDMVNAILYLLDNPTLRGPFNMTAPYPVRNDQFVATLGE
VLGRPTLLRVPAMALRALMGEASQILLGGQRVLPRHLEEAGFGFRYYDLREALDDIIR

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=303, Percent_Identity=34.6534653465347, Blast_Score=172, Evalue=3e-43,
Organism=Escherichia coli, GI1788642, Length=298, Percent_Identity=62.0805369127517, Blast_Score=386, Evalue=1e-108,
Organism=Drosophila melanogaster, GI28573846, Length=299, Percent_Identity=29.4314381270903, Blast_Score=140, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 32911; Mature: 32911

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILITGATGLIGQALCARLHVLGHRLNVLTRSAARARQRIGNSVQCLTSLDNLTSLDGY
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCH
DAVINLAGEPIADKRWSAAQKQVLCDSRWTVTQRLANLIRAGQRPPHVLISGSAVGYYGS
HHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCEEEECCC
QDETPLNEDDPPRNDFTHRLCARWEALAYEAESEYTRVCLLRTGIVLAPNGGALGRMLPL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCCHHHHHHH
FRLGLGGELGNGHQYMSWIHIDDMVNAILYLLDNPTLRGPFNMTAPYPVRNDQFVATLGE
HHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
VLGRPTLLRVPAMALRALMGEASQILLGGQRVLPRHLEEAGFGFRYYDLREALDDIIR
HHCCCCEEHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MEILITGATGLIGQALCARLHVLGHRLNVLTRSAARARQRIGNSVQCLTSLDNLTSLDGY
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCH
DAVINLAGEPIADKRWSAAQKQVLCDSRWTVTQRLANLIRAGQRPPHVLISGSAVGYYGS
HHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCEEEECCC
QDETPLNEDDPPRNDFTHRLCARWEALAYEAESEYTRVCLLRTGIVLAPNGGALGRMLPL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCCHHHHHHH
FRLGLGGELGNGHQYMSWIHIDDMVNAILYLLDNPTLRGPFNMTAPYPVRNDQFVATLGE
HHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
VLGRPTLLRVPAMALRALMGEASQILLGGQRVLPRHLEEAGFGFRYYDLREALDDIIR
HHCCCCEEHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]