| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is nuoH
Identifier: 238920561
GI number: 238920561
Start: 2567145
End: 2568122
Strand: Reverse
Name: nuoH
Synonym: NT01EI_2673
Alternate gene names: 238920561
Gene position: 2568122-2567145 (Counterclockwise)
Preceding gene: 238920562
Following gene: 238920560
Centisome position: 67.36
GC content: 59.0
Gene sequence:
>978_bases ATGAGCGTAATAACGCCGGATACGGTGGAGATCCTTCTCACCGTGCTGAAGGCTGTGGTGATCCTGCTGGTGGTGGTCAC CTGCGGGGCCTTTATGAGCTTCGGTGAACGCCGTCTGCTGGGGCTGTTCCAGAACCGCTATGGGCCAAGTCGGGTCGGGT GGGGCGGTTCGCTGCAGCTGGTGGCGGATATGATCAAGATGTTCTTCAAGGAGGACTGGGTTCCGCCGTTCACCGATCGC CTGATCTTTACCCTGGCGCCGATGATCGCCTTCTGCTCGCTGCTGCTCTCGTTTGCCATCGTGCCGGTGGCGCCGGGCTG GATGGGGGCCGACCTTAACATCGGCATCCTGTTTTTCCTGATGATGGCCGGGCTGGCGGTGTATGCGGTGCTGTTCGCCG GCTGGTCGAGCAACAACAAATACTCTCTGCTGGGGGCGATGCGTGCCTCGGCACAGACCCTGAGCTACGAGGTGTTCCTG GGTCTTTCGCTGATGGGGGTAGTGGCACAGGCCGGTTCCTTCAATATGCAGGTGATCGTCGATTCGCAGACCCATCTGTG GAACATCATTCCGCAGTTCTTCGGCTTCCTGACCTTTATCATCGCCGGTGTCGCGGTGTGTCACCGTCACCCGTTCGACC AGCCGGAGGCCGAACAGGAGCTGGCCGACGGCTACCATATCGAATACTCCGGGATGAAGTTCGGTCTGTTCTTCGTCGGT GAATACATCGGTATCGTCACCATTTCAGCGCTGATCGTCACCCTGTTCTTCGGCGGCTGGCACGGGCCGTGGCTGCCGCC GTTTATCTGGTTTGCCATCAAGACGGCGTTCTTTATGGTGATGTTTATTCTGGTACGCGCCTCCCTGCCGCGTCCCCGCT ATGACCAGGTGATGGCCTTCGGCTGGCGTATTTGCCTGCCGTTGACGCTGATCAACCTGTTGGTCACGGCGGCTGTCATT TTGTATCACGCTCAGTAA
Upstream 100 bases:
>100_bases GCCGCCTGCAGCCGGGCCAGGTCGGTCTGCCGCTGGGTATGCCGGGGGTCGCGCCGGTGTTGAATGGCGTTAAAGTGGAT TACATGCGGGAGGCTGCGGT
Downstream 100 bases:
>100_bases AAGGGGTGAGTGTAACCATGACATTGAAAGAGTTAGTGGTTGGTTTCGGCACCCAAGTACGCAGCCTGTGGATGATAGGC CTGCATGCTTTCGCCAAACG
Product: NADH dehydrogenase subunit H
Products: NA
Alternate protein names: NADH dehydrogenase I subunit H; NDH-1 subunit H
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSVITPDTVEILLTVLKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPSRVGWGGSLQLVADMIKMFFKEDWVPPFTDR LIFTLAPMIAFCSLLLSFAIVPVAPGWMGADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL GLSLMGVVAQAGSFNMQVIVDSQTHLWNIIPQFFGFLTFIIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVG EYIGIVTISALIVTLFFGGWHGPWLPPFIWFAIKTAFFMVMFILVRASLPRPRYDQVMAFGWRICLPLTLINLLVTAAVI LYHAQ
Sequences:
>Translated_325_residues MSVITPDTVEILLTVLKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPSRVGWGGSLQLVADMIKMFFKEDWVPPFTDR LIFTLAPMIAFCSLLLSFAIVPVAPGWMGADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL GLSLMGVVAQAGSFNMQVIVDSQTHLWNIIPQFFGFLTFIIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVG EYIGIVTISALIVTLFFGGWHGPWLPPFIWFAIKTAFFMVMFILVRASLPRPRYDQVMAFGWRICLPLTLINLLVTAAVI LYHAQ >Mature_324_residues SVITPDTVEILLTVLKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPSRVGWGGSLQLVADMIKMFFKEDWVPPFTDRL IFTLAPMIAFCSLLLSFAIVPVAPGWMGADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLG LSLMGVVAQAGSFNMQVIVDSQTHLWNIIPQFFGFLTFIIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGE YIGIVTISALIVTLFFGGWHGPWLPPFIWFAIKTAFFMVMFILVRASLPRPRYDQVMAFGWRICLPLTLINLLVTAAVIL YHAQ
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1005
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 1 (chain H)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 1 family
Homologues:
Organism=Homo sapiens, GI251831107, Length=283, Percent_Identity=39.5759717314488, Blast_Score=195, Evalue=4e-50, Organism=Escherichia coli, GI1788618, Length=325, Percent_Identity=89.5384615384615, Blast_Score=598, Evalue=1e-172, Organism=Escherichia coli, GI1789077, Length=256, Percent_Identity=28.125, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NUOH_EDWI9 (C5B8I0)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002934076.1 - GeneID: 7961699 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_2673 - OMA: MSWLTPE - ProtClustDB: PRK06076 - HAMAP: MF_01350 - InterPro: IPR023020 - InterPro: IPR001694 - InterPro: IPR018086 - PANTHER: PTHR11432
Pfam domain/function: PF00146 NADHdh
EC number: =1.6.99.5
Molecular weight: Translated: 36169; Mature: 36037
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS00667 COMPLEX1_ND1_1; PS00668 COMPLEX1_ND1_2
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1c6f5930)-; HASH(0x1dc398e0)-; HASH(0x1e3bf754)-; HASH(0x1e8a70f8)-; HASH(0x1e42c7e4)-; HASH(0x1e1365f8)-; HASH(0x1e88e958)-; HASH(0x1c837430)-; HASH(0x1e948e78)-;
Cys/Met content:
1.2 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVITPDTVEILLTVLKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPSRVGWGGSLQL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH VADMIKMFFKEDWVPPFTDRLIFTLAPMIAFCSLLLSFAIVPVAPGWMGADLNIGILFFL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH MMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMQVIV HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE DSQTHLWNIIPQFFGFLTFIIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCEEHHHHHH EYIGIVTISALIVTLFFGGWHGPWLPPFIWFAIKTAFFMVMFILVRASLPRPRYDQVMAF HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH GWRICLPLTLINLLVTAAVILYHAQ HHHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure SVITPDTVEILLTVLKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPSRVGWGGSLQL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH VADMIKMFFKEDWVPPFTDRLIFTLAPMIAFCSLLLSFAIVPVAPGWMGADLNIGILFFL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH MMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMQVIV HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE DSQTHLWNIIPQFFGFLTFIIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCEEHHHHHH EYIGIVTISALIVTLFFGGWHGPWLPPFIWFAIKTAFFMVMFILVRASLPRPRYDQVMAF HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH GWRICLPLTLINLLVTAAVILYHAQ HHHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA