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The map label for this gene is pipD [H]

Identifier: 238920542

GI number: 238920542

Start: 2548284

End: 2549654

Strand: Direct

Name: pipD [H]

Synonym: NT01EI_2654

Alternate gene names: 238920542

Gene position: 2548284-2549654 (Clockwise)

Preceding gene: 238920541

Following gene: 238920549

Centisome position: 66.84

GC content: 56.09

Gene sequence:

>1371_bases
ATGGTTCTTTTTATCGCAGCGCGAAACGAAGACTACTCAGCAAATAACGCCAAGCATATGGTCATCCACCCGGCGGCCCA
TAATCAGCACGGGGTGTTTAAATCCCACGGTAATGACTTTACCTATCCACTGCCGAAAGAGGCGCTGCGCTACACCGCCA
TTCACGATTTTGATACCCAGGATAAATCAATGGGTGAAGCCGGCTTCAACTCCGCCGGCGTCGGAATGACCGCGACCGAA
ACGCTCTACAACGGGCAACCGGCGCTGAAGGCCGATCCTTATGTAGAGAAAACCGGGATCACGGAAGACGCTATCCAGAC
CGTGGTGCTTCCGCGTATTCACAGCGCGCGTGAGGGCGTTGAGCTGCTGGGCAAGATCATTGAGCAGCAGGGAGCCGGTG
AAGGCTTTGGCGTTGCCTTTGTTGACCAGCACGATCTGTGGTATCTGGAGACCGGCAGCGGCCACCAGTGGATGGCGACC
CGCCTGCCAGCGGACAAATACCTGATCTCCGCCAATCAGGGCCGCCTGCGTCAATATGATCCGAAAGACACCGCAAACTA
CCTGGGATCCCCGACGCTGATCAGCTTTGCCGAACAGCATGGACTGTACCGCCCGAAAGACGGCGCCTTCGACTTCCACA
AGGCCTATTCTCAGGACGTCGAAAACGATGTGACCTATAACTATCCGCGCGTCTGGACGCTGCAGCACATGTTCAACCCG
CAGCTGAAGACCACCATCACCGACGGTAAAAACTTCCCGGTCTTCCTCACCCCGGCCAAGAAGATCAGTATTGCCGACGT
AGAGCTGGCGCTGCGTAACCATTATCAGGGGACCACGCACGACCCCTATGCCAACAACAACCCGAAAGAGCCTTACCGTC
CGATCTCAGTATTCCGCACCCAGGAGTCGCACATCCTGCAGGTCCGTCCTCACCTGCCAAAAGCGATCGGCGAAGTGGAA
TACGTCGCCTTCGGGATGTCCGCACTGAGTGTCTATATTCCTTACTATCAAGGCATTGAGCACTATTTGCCGGGCTACGA
CAAGGGGAGCGATCGGGCCAGCGATGACTCCGTCAACTGGAAGTTCCGCACGCTGCAAACCCTGGTCATGCAGGATTACA
ACGCCTATGCGCCAGACGTTCAGCGCGCCTATAGCACGTTTGAGCAACAGACGGCCCAACGTCAGCAGAACATGGAGCAA
GAGTACCTGACGCTCTACAAGTCTCAGCCGAAAAAGGCCCGGCTGCTGCTGCAACAGTTTGAGGATCAGACCATGCAGGA
CGCGCTGAAGCTGACCGATCAGCTGACCAGTCAGGTCGTAACCAAAATGACCCATGCCACCGACATGAAGTATCACTTCG
AAGGGGCATAA

Upstream 100 bases:

>100_bases
CTTATGAAAACCACTCTGCCTGCGGCAGCGATCGCCACGCTGTGCGTCGGCCAGGCCATGGCCTGTACGACGATACTGGT
GGGCAATCAGGCCACGACCG

Downstream 100 bases:

>100_bases
CGCCAGGCGCAGGCCATAAAAAAACACCCCGCGCTGCGGGGTGTTTTTTTTATGGACGCTTAACCGCGACGGCTGAACAG
CGCTCGCCGGGAAAGATCCA

Product: peptidase family C69

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MVLFIAARNEDYSANNAKHMVIHPAAHNQHGVFKSHGNDFTYPLPKEALRYTAIHDFDTQDKSMGEAGFNSAGVGMTATE
TLYNGQPALKADPYVEKTGITEDAIQTVVLPRIHSAREGVELLGKIIEQQGAGEGFGVAFVDQHDLWYLETGSGHQWMAT
RLPADKYLISANQGRLRQYDPKDTANYLGSPTLISFAEQHGLYRPKDGAFDFHKAYSQDVENDVTYNYPRVWTLQHMFNP
QLKTTITDGKNFPVFLTPAKKISIADVELALRNHYQGTTHDPYANNNPKEPYRPISVFRTQESHILQVRPHLPKAIGEVE
YVAFGMSALSVYIPYYQGIEHYLPGYDKGSDRASDDSVNWKFRTLQTLVMQDYNAYAPDVQRAYSTFEQQTAQRQQNMEQ
EYLTLYKSQPKKARLLLQQFEDQTMQDALKLTDQLTSQVVTKMTHATDMKYHFEGA

Sequences:

>Translated_456_residues
MVLFIAARNEDYSANNAKHMVIHPAAHNQHGVFKSHGNDFTYPLPKEALRYTAIHDFDTQDKSMGEAGFNSAGVGMTATE
TLYNGQPALKADPYVEKTGITEDAIQTVVLPRIHSAREGVELLGKIIEQQGAGEGFGVAFVDQHDLWYLETGSGHQWMAT
RLPADKYLISANQGRLRQYDPKDTANYLGSPTLISFAEQHGLYRPKDGAFDFHKAYSQDVENDVTYNYPRVWTLQHMFNP
QLKTTITDGKNFPVFLTPAKKISIADVELALRNHYQGTTHDPYANNNPKEPYRPISVFRTQESHILQVRPHLPKAIGEVE
YVAFGMSALSVYIPYYQGIEHYLPGYDKGSDRASDDSVNWKFRTLQTLVMQDYNAYAPDVQRAYSTFEQQTAQRQQNMEQ
EYLTLYKSQPKKARLLLQQFEDQTMQDALKLTDQLTSQVVTKMTHATDMKYHFEGA
>Mature_456_residues
MVLFIAARNEDYSANNAKHMVIHPAAHNQHGVFKSHGNDFTYPLPKEALRYTAIHDFDTQDKSMGEAGFNSAGVGMTATE
TLYNGQPALKADPYVEKTGITEDAIQTVVLPRIHSAREGVELLGKIIEQQGAGEGFGVAFVDQHDLWYLETGSGHQWMAT
RLPADKYLISANQGRLRQYDPKDTANYLGSPTLISFAEQHGLYRPKDGAFDFHKAYSQDVENDVTYNYPRVWTLQHMFNP
QLKTTITDGKNFPVFLTPAKKISIADVELALRNHYQGTTHDPYANNNPKEPYRPISVFRTQESHILQVRPHLPKAIGEVE
YVAFGMSALSVYIPYYQGIEHYLPGYDKGSDRASDDSVNWKFRTLQTLVMQDYNAYAPDVQRAYSTFEQQTAQRQQNMEQ
EYLTLYKSQPKKARLLLQQFEDQTMQDALKLTDQLTSQVVTKMTHATDMKYHFEGA

Specific function: Unknown

COG id: COG4690

COG function: function code E; Dipeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C69 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005322 [H]

Pfam domain/function: PF03577 Peptidase_C69 [H]

EC number: NA

Molecular weight: Translated: 51812; Mature: 51812

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLFIAARNEDYSANNAKHMVIHPAAHNQHGVFKSHGNDFTYPLPKEALRYTAIHDFDTQ
CEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCC
DKSMGEAGFNSAGVGMTATETLYNGQPALKADPYVEKTGITEDAIQTVVLPRIHSAREGV
CCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHH
ELLGKIIEQQGAGEGFGVAFVDQHDLWYLETGSGHQWMATRLPADKYLISANQGRLRQYD
HHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCEEEEECCCCCCEEEECCCCCCCCCC
PKDTANYLGSPTLISFAEQHGLYRPKDGAFDFHKAYSQDVENDVTYNYPRVWTLQHMFNP
CCHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHCCC
QLKTTITDGKNFPVFLTPAKKISIADVELALRNHYQGTTHDPYANNNPKEPYRPISVFRT
CEEEEEECCCCCCEEECCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEEEC
QESHILQVRPHLPKAIGEVEYVAFGMSALSVYIPYYQGIEHYLPGYDKGSDRASDDSVNW
CCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCC
KFRTLQTLVMQDYNAYAPDVQRAYSTFEQQTAQRQQNMEQEYLTLYKSQPKKARLLLQQF
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EDQTMQDALKLTDQLTSQVVTKMTHATDMKYHFEGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
>Mature Secondary Structure
MVLFIAARNEDYSANNAKHMVIHPAAHNQHGVFKSHGNDFTYPLPKEALRYTAIHDFDTQ
CEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCC
DKSMGEAGFNSAGVGMTATETLYNGQPALKADPYVEKTGITEDAIQTVVLPRIHSAREGV
CCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHH
ELLGKIIEQQGAGEGFGVAFVDQHDLWYLETGSGHQWMATRLPADKYLISANQGRLRQYD
HHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCEEEEECCCCCCEEEECCCCCCCCCC
PKDTANYLGSPTLISFAEQHGLYRPKDGAFDFHKAYSQDVENDVTYNYPRVWTLQHMFNP
CCHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHCCC
QLKTTITDGKNFPVFLTPAKKISIADVELALRNHYQGTTHDPYANNNPKEPYRPISVFRT
CEEEEEECCCCCCEEECCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEEEC
QESHILQVRPHLPKAIGEVEYVAFGMSALSVYIPYYQGIEHYLPGYDKGSDRASDDSVNW
CCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCC
KFRTLQTLVMQDYNAYAPDVQRAYSTFEQQTAQRQQNMEQEYLTLYKSQPKKARLLLQQF
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EDQTMQDALKLTDQLTSQVVTKMTHATDMKYHFEGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9723926 [H]