| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920541
Identifier: 238920541
GI number: 238920541
Start: 2548187
End: 2548330
Strand: Direct
Name: 238920541
Synonym: NT01EI_2653
Alternate gene names: NA
Gene position: 2548187-2548330 (Clockwise)
Preceding gene: 238920532
Following gene: 238920542
Centisome position: 66.84
GC content: 56.25
Gene sequence:
>144_bases ATGAAAACCACTCTGCCTGCGGCAGCGATCGCCACGCTGTGCGTCGGCCAGGCCATGGCCTGTACGACGATACTGGTGGG CAATCAGGCCACGACCGATGGTTCTTTTTATCGCAGCGCGAAACGAAGACTACTCAGCAAATAA
Upstream 100 bases:
>100_bases GGTAACGCGCTTTTTTATTGACATGGTTTGTAACTGACGCTGACGCGATCTACTGTGAAGGCGATTTACGAAGCAATACC TATAACGATTGGAGTCACTT
Downstream 100 bases:
>100_bases CGCCAAGCATATGGTCATCCACCCGGCGGCCCATAATCAGCACGGGGTGTTTAAATCCCACGGTAATGACTTTACCTATC CACTGCCGAAAGAGGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 47; Mature: 47
Protein sequence:
>47_residues MKTTLPAAAIATLCVGQAMACTTILVGNQATTDGSFYRSAKRRLLSK
Sequences:
>Translated_47_residues MKTTLPAAAIATLCVGQAMACTTILVGNQATTDGSFYRSAKRRLLSK >Mature_47_residues MKTTLPAAAIATLCVGQAMACTTILVGNQATTDGSFYRSAKRRLLSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4932; Mature: 4932
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTLPAAAIATLCVGQAMACTTILVGNQATTDGSFYRSAKRRLLSK CCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKTTLPAAAIATLCVGQAMACTTILVGNQATTDGSFYRSAKRRLLSK CCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA