| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is tyrP [H]
Identifier: 238920531
GI number: 238920531
Start: 2536610
End: 2537827
Strand: Direct
Name: tyrP [H]
Synonym: NT01EI_2643
Alternate gene names: 238920531
Gene position: 2536610-2537827 (Clockwise)
Preceding gene: 238920529
Following gene: 238920532
Centisome position: 66.54
GC content: 63.22
Gene sequence:
>1218_bases GTGAGAAATCGTACAATTGGCAGTGTTTTTATCGTGGCAGGAACCACCATTGGCGCAGGGATGCTGGCGATGCCGCTGGC CGCCGCCGGCGTCGGCTTTAGTACCACGCTGGTGATGCTGATCGGGCTGTGGGCGCTGATGTGCTACACGGCTCTGCTGA TGGTCGAAGTCTACCAGCATGCCCCGGCCGATGAAGGGCTGGGCACCCTGGCCCGCCGCTATCTGGGGCGCCCCGGCCAA TGGCTGGCCGGTATCAGCATGCTGTTCCTCATGTACGCGCTCACCGCGGCCTATATCAGCGGTGCCGGTGAGCTGTTGGC CGCCAGCCTGGGACAGTGGCTGTCACTGTCGGTTTCACCGGCAGTGGGGGTGCTGCTGTTCACGCTGGCCGGTGGCACTA TCGTCAGCGTCGGTACCCATTCGGTCGATCTGTTCAACCGCCTGCTGTTCAGCGCCAAAATCGTGCTGCTGGTGGTGATG CTGACGCTGATGATGCCCCACATTCAGCATACCAACCTGCTCAGCATGCCGCTGGAAAAAGGGCTGGCGCTGTCGGCTAT TCCGGTCATCTTTACCTCTTTTGGGTTCCACGGCAGCGTGCCGAGCATCGTCAGCTACATGAAAGGTGATATGCGCCGCC TGCGGCTCATCTTCATTACCGGCAGTGCCATTCCGCTGCTGGCCTATATTTTCTGGCAGCTGGCCACCCTGGGCACCATC AGCAACCACACCTTTCTCGGCCTGCTAGCGACCCATGCCGGACTGAACGGGCTGCTGCAGGCGGTACGTGCCGTGGTGGC AGCGCCTCATGTCGAGCTGGCGGTGCATCTGTTCGCCGACCTGGCGCTGGCGACCTCGTTTCTTGGCGTGTCACTGGGGC TATTTGACTATCTGGGCGATCTGTTCCAACGCCGCCGTAACGCCTCCGGGCGCTTGCAGACCGGCATTCTGACCTTTATT CCGCCCCTGGCCTTTGCCCTGTTCTATCCGCAGGGATTCGTCATGGCGCTGGGCTACGCCGCCATCGCGCTGGCGGTGCT GGCGCTGCTGCTGCCGGCGCTGCTGGTATGGCAAACCCGCCGTCGCCACGGCGGACTGCCCAACGGCTACCGGGTCGCCG GCGGCCGCCCGCTGCTGTGGCTGGTGCTGCTGTGCGGTGTCGCAGTGATCGCCATACAGCTGTCAATCGCGGCGGGGCTC TTGCCAGAGGTGGGATAA
Upstream 100 bases:
>100_bases ATAAATAATTACATATGATGTAACGACAGTTTGACGATAGTGGTATTTTCCCGTACGCTGCCACAAAATAACTCCCTGGA GCAGTAAAGCAGAGGAAAGC
Downstream 100 bases:
>100_bases GGCAGTATGGTGAAACGATGAAAATTACACTGTCCCGCCTGATCCCCTTTCGCTGGTGGCGCCGTTTACTGCGGCGGCCC GATACTGTGTTCTTCTGATT
Product: tyrosine-specific transport protein
Products: Proton [Cytoplasm]; L-tyrosine [Cytoplasm] [C]
Alternate protein names: Tyrosine permease [H]
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MRNRTIGSVFIVAGTTIGAGMLAMPLAAAGVGFSTTLVMLIGLWALMCYTALLMVEVYQHAPADEGLGTLARRYLGRPGQ WLAGISMLFLMYALTAAYISGAGELLAASLGQWLSLSVSPAVGVLLFTLAGGTIVSVGTHSVDLFNRLLFSAKIVLLVVM LTLMMPHIQHTNLLSMPLEKGLALSAIPVIFTSFGFHGSVPSIVSYMKGDMRRLRLIFITGSAIPLLAYIFWQLATLGTI SNHTFLGLLATHAGLNGLLQAVRAVVAAPHVELAVHLFADLALATSFLGVSLGLFDYLGDLFQRRRNASGRLQTGILTFI PPLAFALFYPQGFVMALGYAAIALAVLALLLPALLVWQTRRRHGGLPNGYRVAGGRPLLWLVLLCGVAVIAIQLSIAAGL LPEVG
Sequences:
>Translated_405_residues MRNRTIGSVFIVAGTTIGAGMLAMPLAAAGVGFSTTLVMLIGLWALMCYTALLMVEVYQHAPADEGLGTLARRYLGRPGQ WLAGISMLFLMYALTAAYISGAGELLAASLGQWLSLSVSPAVGVLLFTLAGGTIVSVGTHSVDLFNRLLFSAKIVLLVVM LTLMMPHIQHTNLLSMPLEKGLALSAIPVIFTSFGFHGSVPSIVSYMKGDMRRLRLIFITGSAIPLLAYIFWQLATLGTI SNHTFLGLLATHAGLNGLLQAVRAVVAAPHVELAVHLFADLALATSFLGVSLGLFDYLGDLFQRRRNASGRLQTGILTFI PPLAFALFYPQGFVMALGYAAIALAVLALLLPALLVWQTRRRHGGLPNGYRVAGGRPLLWLVLLCGVAVIAIQLSIAAGL LPEVG >Mature_405_residues MRNRTIGSVFIVAGTTIGAGMLAMPLAAAGVGFSTTLVMLIGLWALMCYTALLMVEVYQHAPADEGLGTLARRYLGRPGQ WLAGISMLFLMYALTAAYISGAGELLAASLGQWLSLSVSPAVGVLLFTLAGGTIVSVGTHSVDLFNRLLFSAKIVLLVVM LTLMMPHIQHTNLLSMPLEKGLALSAIPVIFTSFGFHGSVPSIVSYMKGDMRRLRLIFITGSAIPLLAYIFWQLATLGTI SNHTFLGLLATHAGLNGLLQAVRAVVAAPHVELAVHLFADLALATSFLGVSLGLFDYLGDLFQRRRNASGRLQTGILTFI PPLAFALFYPQGFVMALGYAAIALAVLALLLPALLVWQTRRRHGGLPNGYRVAGGRPLLWLVLLCGVAVIAIQLSIAAGL LPEVG
Specific function: Involved in transporting tyrosine across the cytoplasmic membrane [H]
COG id: COG0814
COG function: function code E; Amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid/polyamine transporter 2 family. Mtr/TnaB/TyrP permease subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788218, Length=406, Percent_Identity=75.1231527093596, Blast_Score=597, Evalue=1e-172, Organism=Escherichia coli, GI1789552, Length=386, Percent_Identity=32.3834196891192, Blast_Score=204, Evalue=9e-54, Organism=Escherichia coli, GI1790145, Length=412, Percent_Identity=28.3980582524272, Blast_Score=189, Evalue=3e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002091 - InterPro: IPR013061 - InterPro: IPR013059 - InterPro: IPR018227 [H]
Pfam domain/function: PF03222 Trp_Tyr_perm [H]
EC number: NA
Molecular weight: Translated: 42991; Mature: 42991
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: PS00594 AROMATIC_AA_PERMEASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNRTIGSVFIVAGTTIGAGMLAMPLAAAGVGFSTTLVMLIGLWALMCYTALLMVEVYQH CCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC APADEGLGTLARRYLGRPGQWLAGISMLFLMYALTAAYISGAGELLAASLGQWLSLSVSP CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCH AVGVLLFTLAGGTIVSVGTHSVDLFNRLLFSAKIVLLVVMLTLMMPHIQHTNLLSMPLEK HHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC GLALSAIPVIFTSFGFHGSVPSIVSYMKGDMRRLRLIFITGSAIPLLAYIFWQLATLGTI CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHC SNHTFLGLLATHAGLNGLLQAVRAVVAAPHVELAVHLFADLALATSFLGVSLGLFDYLGD CCCHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFQRRRNASGRLQTGILTFIPPLAFALFYPQGFVMALGYAAIALAVLALLLPALLVWQTR HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRHGGLPNGYRVAGGRPLLWLVLLCGVAVIAIQLSIAAGLLPEVG HHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRNRTIGSVFIVAGTTIGAGMLAMPLAAAGVGFSTTLVMLIGLWALMCYTALLMVEVYQH CCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC APADEGLGTLARRYLGRPGQWLAGISMLFLMYALTAAYISGAGELLAASLGQWLSLSVSP CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCH AVGVLLFTLAGGTIVSVGTHSVDLFNRLLFSAKIVLLVVMLTLMMPHIQHTNLLSMPLEK HHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC GLALSAIPVIFTSFGFHGSVPSIVSYMKGDMRRLRLIFITGSAIPLLAYIFWQLATLGTI CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHC SNHTFLGLLATHAGLNGLLQAVRAVVAAPHVELAVHLFADLALATSFLGVSLGLFDYLGD CCCHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFQRRRNASGRLQTGILTFIPPLAFALFYPQGFVMALGYAAIALAVLALLLPALLVWQTR HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRHGGLPNGYRVAGGRPLLWLVLLCGVAVIAIQLSIAAGLLPEVG HHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-tyrosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3049553; 9097040; 9278503 [H]