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The map label for this gene is ybhS [H]

Identifier: 238920513

GI number: 238920513

Start: 2512773

End: 2513912

Strand: Direct

Name: ybhS [H]

Synonym: NT01EI_2625

Alternate gene names: 238920513

Gene position: 2512773-2513912 (Clockwise)

Preceding gene: 238920512

Following gene: 238920514

Centisome position: 65.91

GC content: 61.67

Gene sequence:

>1140_bases
ATGGCTGACAGCGCCACCTACGTCTCCTGGCGCCGTCTGCGCGCCCTGTGCCGAAAAGAGAGCACCCAGATCGTGCGCGA
CCCCAGCAGCCTGCTGATCGCGGTGGTGATCCCGCTGCTGCTGCTGTTTATCTTTGGCTACGGCATCAATTTGGACTCCA
GCCGCCTACGCATCGGCATTCTGCTGGAACAGCAGACCCCACAGGCGCGCGACCTGGCCGATACCTTTACCGGCTCACCC
TATATCGACGCCACCGTCAGCGACGATCGGCGGCAGCTGACCGCCATGCTACAGGCCGGGCAAATCCGCGGCATGGTGGT
TATCCCGGTCGACTTCGCCACGCGCCTGCTGCGCACTCAGGATGTCGCACCGATCCAGGTGATCACCGACGGCAGCGAGC
CCAACACCGCCAACTTTGTCCGCGGCTACACCGAAGGGGTCTGGCAGATCTGGCTGCAACAGCACGCCCTGACAAGCGGT
CAGCCTTACCTGCCGCCCATCGACATACAGATGCGCTACTGGTTTAACCCCGCCGCCATCAGCCAGCACTTTATCATTCC
CGGCGCGATCACCATTATCATGACCGTGATCGGCGCTATCCTGACCTCGCTGGTGATCGCCCGCGAATGGGAGCGCGGTA
CCATGGAGGCCCTGCTCTCCACCCAGGTCACCCGCACCGAGCTTCTGCTCTCCAAGCTGCTGCCCTATTATGTGCTGGGC
ATGCTGGCGATGGGGCTGTGCATGGTGGTGGCAGTCTTCATCATGGGCGTGCCGTTTCGTGGCTCGCTGCCGATCCTGTT
CGCCATGACCAGCCTGTTTATGGCCAGCACCCTGGGGATGGGACTGCTGATCTCCACCGTCACGCGCAACCAGTTCAACG
CGGCGATGATCGCCCTTAATGCGGCCTTCCTGCCGGCGGTGATGCTCTCCGGCTTTGTGTTTGAAATCGACAGCATGCCG
GCCATCGTGCGCGCGGTGACCTACGTCATTCCGGCACGCTACTTCGTCAGTACCCTGCAGTCCCTGTTTTTGGCGGGTAA
TATCACCAGCGTACTGATGGTTAACCTGACCTTTATGCTGGCATCAGCGCTGATTTTCATCGGCCTGACGGCCCTGAAAA
CCCGGCGGCGGCTGGACTGA

Upstream 100 bases:

>100_bases
GACGACCTCAAGGCGCGCATCGCCTGCGACGAGAACCCCAACCCGACCATGGAGCAGGCCTTCATCGGGCTGGTGCAGGC
CTACGACCGGGAGCATGCCC

Downstream 100 bases:

>100_bases
GGAGGAGAAGAGCATGCTGCACCGTCTGCTGACCCTGATCGTCAAAGAGCTGCAGTCCCTGTTGCGCGACCCGCAGACCC
GGACCATTCTGGTGGTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MADSATYVSWRRLRALCRKESTQIVRDPSSLLIAVVIPLLLLFIFGYGINLDSSRLRIGILLEQQTPQARDLADTFTGSP
YIDATVSDDRRQLTAMLQAGQIRGMVVIPVDFATRLLRTQDVAPIQVITDGSEPNTANFVRGYTEGVWQIWLQQHALTSG
QPYLPPIDIQMRYWFNPAAISQHFIIPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRTELLLSKLLPYYVLG
MLAMGLCMVVAVFIMGVPFRGSLPILFAMTSLFMASTLGMGLLISTVTRNQFNAAMIALNAAFLPAVMLSGFVFEIDSMP
AIVRAVTYVIPARYFVSTLQSLFLAGNITSVLMVNLTFMLASALIFIGLTALKTRRRLD

Sequences:

>Translated_379_residues
MADSATYVSWRRLRALCRKESTQIVRDPSSLLIAVVIPLLLLFIFGYGINLDSSRLRIGILLEQQTPQARDLADTFTGSP
YIDATVSDDRRQLTAMLQAGQIRGMVVIPVDFATRLLRTQDVAPIQVITDGSEPNTANFVRGYTEGVWQIWLQQHALTSG
QPYLPPIDIQMRYWFNPAAISQHFIIPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRTELLLSKLLPYYVLG
MLAMGLCMVVAVFIMGVPFRGSLPILFAMTSLFMASTLGMGLLISTVTRNQFNAAMIALNAAFLPAVMLSGFVFEIDSMP
AIVRAVTYVIPARYFVSTLQSLFLAGNITSVLMVNLTFMLASALIFIGLTALKTRRRLD
>Mature_378_residues
ADSATYVSWRRLRALCRKESTQIVRDPSSLLIAVVIPLLLLFIFGYGINLDSSRLRIGILLEQQTPQARDLADTFTGSPY
IDATVSDDRRQLTAMLQAGQIRGMVVIPVDFATRLLRTQDVAPIQVITDGSEPNTANFVRGYTEGVWQIWLQQHALTSGQ
PYLPPIDIQMRYWFNPAAISQHFIIPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRTELLLSKLLPYYVLGM
LAMGLCMVVAVFIMGVPFRGSLPILFAMTSLFMASTLGMGLLISTVTRNQFNAAMIALNAAFLPAVMLSGFVFEIDSMPA
IVRAVTYVIPARYFVSTLQSLFLAGNITSVLMVNLTFMLASALIFIGLTALKTRRRLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=372, Percent_Identity=76.3440860215054, Blast_Score=578, Evalue=1e-166,
Organism=Escherichia coli, GI48994943, Length=377, Percent_Identity=31.8302387267904, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1787010, Length=335, Percent_Identity=26.865671641791, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI226510979, Length=288, Percent_Identity=25, Blast_Score=75, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24650855, Length=369, Percent_Identity=21.680216802168, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41881; Mature: 41750

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSATYVSWRRLRALCRKESTQIVRDPSSLLIAVVIPLLLLFIFGYGINLDSSRLRIGI
CCCCCHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
LLEQQTPQARDLADTFTGSPYIDATVSDDRRQLTAMLQAGQIRGMVVIPVDFATRLLRTQ
EEECCCCCHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHC
DVAPIQVITDGSEPNTANFVRGYTEGVWQIWLQQHALTSGQPYLPPIDIQMRYWFNPAAI
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHH
SQHFIIPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRTELLLSKLLPYYVLG
CCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLAMGLCMVVAVFIMGVPFRGSLPILFAMTSLFMASTLGMGLLISTVTRNQFNAAMIALN
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AAFLPAVMLSGFVFEIDSMPAIVRAVTYVIPARYFVSTLQSLFLAGNITSVLMVNLTFML
HHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ASALIFIGLTALKTRRRLD
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADSATYVSWRRLRALCRKESTQIVRDPSSLLIAVVIPLLLLFIFGYGINLDSSRLRIGI
CCCCHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
LLEQQTPQARDLADTFTGSPYIDATVSDDRRQLTAMLQAGQIRGMVVIPVDFATRLLRTQ
EEECCCCCHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHC
DVAPIQVITDGSEPNTANFVRGYTEGVWQIWLQQHALTSGQPYLPPIDIQMRYWFNPAAI
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHH
SQHFIIPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRTELLLSKLLPYYVLG
CCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLAMGLCMVVAVFIMGVPFRGSLPILFAMTSLFMASTLGMGLLISTVTRNQFNAAMIALN
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AAFLPAVMLSGFVFEIDSMPAIVRAVTYVIPARYFVSTLQSLFLAGNITSVLMVNLTFML
HHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ASALIFIGLTALKTRRRLD
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]