| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yejM [H]
Identifier: 238920500
GI number: 238920500
Start: 2500552
End: 2502300
Strand: Direct
Name: yejM [H]
Synonym: NT01EI_2611
Alternate gene names: 238920500
Gene position: 2500552-2502300 (Clockwise)
Preceding gene: 238920499
Following gene: 238920508
Centisome position: 65.59
GC content: 60.15
Gene sequence:
>1749_bases ATGGTAACGAACCGTCAGCGCTATCGTGAAAAGGTCTCCCAGATGATCAGCTGGGGGCACTGGTTCGCCCTGTTTAATAT TCTGCTGGCGCTGCTGCTGGGCAGTCGTTATCTGTTTATTGCCGACTGGCCAGCGACCCTGGCCGGGCGTATCTATGCCA TCGTCAGCTGGCTAGGTCACTTCAGCTTCCTGGGGTTTGCCGCCTATCTTCTTACGCTGTTTCCGTTAACCTTTATTGTA ATGTCGCAGCGTCTGCTGCGCTTTCTTTCCGCGGCACTGGCCACCGCCGGACTGACCCTGCTGCTGATCGACTCCGAGGT ATTCACCCGCTTCCACCTGCACCTTAACCCGCTGGTCTGGGAGCTGGTCATTAACCCCGCGCAGGGGGAGCTCTCCCGCG ACTGGCAGCTGATGTTCATCTGCGTGCCGGTGCTGTTTCTGATCGAGATGTTGTTCGGTACCTGGAGCTGGCAAAAACTG CGTAGCCTCAACCGGCAAACCTTTGGCAAGCCGCTGGCACTGGTATTTATCGTCTCATTCCTGGCCTCGCACCTGATCTA TATCTGGGCGGATGCCAACTTCTACCGCCCCATCACTATGCAGCGCGCCAATCTGCCGCTCTCCTACCCGATGACGGCGC GGCGCTTCCTGGAAAAACACGGACTGTTAAATGCACAGGCCTATCAGGAGCGGCTGATCCGTACCGGCAATCCTGAGGCA TTAGCCATTGAGTACCCGCTGGGTGAGCTGAGCTACAGCGACAAAGGCGCCGGGCTGAACCTGCTGGTGGTGGTCGCCGA CGGCCTGCGGGCCGATGCGCTGCCGCAAACCATGCCGGAGCTGGCCGCCTTCAGTGCCAAAAACCTGAACTTTACCCACC ATTACAGCACCGGCAACGCCATCGACAGCGGGCTGTTCGGTCTGTTTTACGGCATCTCGCCCAGCTATCTGGACAGTATC CTGGCCGGACGTAAGCCGTCGGCGCTGATCGACGCGCTAACGCATCAACACTATCAGTTCGGCCTGTTCTCATCGGATGG CTTCAAAGCCCCACTCTATCGTCAGGCGCTGTTCAGTGATTTTACCTTGCCCGCACCGCAGAAACAGAGCGATGCCGCCA CGGTGCATCAGTGGGAAAACTGGCTGGATACCCAAACATCCACCCACCCGTGGTTTGCCTACGTCAATCTGAACGGCGAG GCCGACGGCGGAGCGCTGTCAGCCAGCCGCTATCAGCGCTCGGCTCGGCAGCTGGATGGACAGATCGCCGCAATGATCGA CGCCCTCCGCGCGCGTCAGGTGCTGAAAAACACGGTAGTGGTGATCACCGGCAGTCACGGCGTGGCGCTGGACGGCGAGG ATCACGCCGACGCCGACTACAGCCGAGCCCGGTTGCAGGTGCCGCTGATCATCCACTGGCCGGGCACCTCGCCGCAATCC ATCGCCAAGATGACCAACCATGAAGATATCATGGCCACGCTGATGCAGCGTCTGCTGCACGTCGACAGCCGGGCCGCCAA CTACACCCAGGGCGAGGATCTGTTTGCCGCCGCGCGCAGTCACGACTGGCTGACGCTGGGCAACGGCAGCGATCTGGTGA TCGTCACGCCGCAGCAAACCATCGTGCTCAACCGTAACGGCACCTACCGCGCCTACGATCGCGACAATCGAGAGCTGACG GGCGAGCGGCTGCAGCTACCGCTGCTGCTACAGGTATTGACCGACGTGAAGCGCTTTATTGCCAACTAG
Upstream 100 bases:
>100_bases ATCGCACGCTCCTTTGCCGACGCGCTTCAGGCCTCCATTCGGGAAGATAAAGCCCACTGACCCTTCGGGTACAGAGATTC GACGGAAACAGACAGAGTTT
Downstream 100 bases:
>100_bases GGCGCCGCACAGGGAAATATCGCACTACCGCGCGATACCACAACAAAAGGCGGCCGATTGCCTAAAACAACGGCAAACGG TGCGATCACGGCTTGCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 582; Mature: 582
Protein sequence:
>582_residues MVTNRQRYREKVSQMISWGHWFALFNILLALLLGSRYLFIADWPATLAGRIYAIVSWLGHFSFLGFAAYLLTLFPLTFIV MSQRLLRFLSAALATAGLTLLLIDSEVFTRFHLHLNPLVWELVINPAQGELSRDWQLMFICVPVLFLIEMLFGTWSWQKL RSLNRQTFGKPLALVFIVSFLASHLIYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLNAQAYQERLIRTGNPEA LAIEYPLGELSYSDKGAGLNLLVVVADGLRADALPQTMPELAAFSAKNLNFTHHYSTGNAIDSGLFGLFYGISPSYLDSI LAGRKPSALIDALTHQHYQFGLFSSDGFKAPLYRQALFSDFTLPAPQKQSDAATVHQWENWLDTQTSTHPWFAYVNLNGE ADGGALSASRYQRSARQLDGQIAAMIDALRARQVLKNTVVVITGSHGVALDGEDHADADYSRARLQVPLIIHWPGTSPQS IAKMTNHEDIMATLMQRLLHVDSRAANYTQGEDLFAAARSHDWLTLGNGSDLVIVTPQQTIVLNRNGTYRAYDRDNRELT GERLQLPLLLQVLTDVKRFIAN
Sequences:
>Translated_582_residues MVTNRQRYREKVSQMISWGHWFALFNILLALLLGSRYLFIADWPATLAGRIYAIVSWLGHFSFLGFAAYLLTLFPLTFIV MSQRLLRFLSAALATAGLTLLLIDSEVFTRFHLHLNPLVWELVINPAQGELSRDWQLMFICVPVLFLIEMLFGTWSWQKL RSLNRQTFGKPLALVFIVSFLASHLIYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLNAQAYQERLIRTGNPEA LAIEYPLGELSYSDKGAGLNLLVVVADGLRADALPQTMPELAAFSAKNLNFTHHYSTGNAIDSGLFGLFYGISPSYLDSI LAGRKPSALIDALTHQHYQFGLFSSDGFKAPLYRQALFSDFTLPAPQKQSDAATVHQWENWLDTQTSTHPWFAYVNLNGE ADGGALSASRYQRSARQLDGQIAAMIDALRARQVLKNTVVVITGSHGVALDGEDHADADYSRARLQVPLIIHWPGTSPQS IAKMTNHEDIMATLMQRLLHVDSRAANYTQGEDLFAAARSHDWLTLGNGSDLVIVTPQQTIVLNRNGTYRAYDRDNRELT GERLQLPLLLQVLTDVKRFIAN >Mature_582_residues MVTNRQRYREKVSQMISWGHWFALFNILLALLLGSRYLFIADWPATLAGRIYAIVSWLGHFSFLGFAAYLLTLFPLTFIV MSQRLLRFLSAALATAGLTLLLIDSEVFTRFHLHLNPLVWELVINPAQGELSRDWQLMFICVPVLFLIEMLFGTWSWQKL RSLNRQTFGKPLALVFIVSFLASHLIYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLNAQAYQERLIRTGNPEA LAIEYPLGELSYSDKGAGLNLLVVVADGLRADALPQTMPELAAFSAKNLNFTHHYSTGNAIDSGLFGLFYGISPSYLDSI LAGRKPSALIDALTHQHYQFGLFSSDGFKAPLYRQALFSDFTLPAPQKQSDAATVHQWENWLDTQTSTHPWFAYVNLNGE ADGGALSASRYQRSARQLDGQIAAMIDALRARQVLKNTVVVITGSHGVALDGEDHADADYSRARLQVPLIIHWPGTSPQS IAKMTNHEDIMATLMQRLLHVDSRAANYTQGEDLFAAARSHDWLTLGNGSDLVIVTPQQTIVLNRNGTYRAYDRDNRELT GERLQLPLLLQVLTDVKRFIAN
Specific function: Unknown
COG id: COG3083
COG function: function code R; Predicted hydrolase of alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0842 [H]
Homologues:
Organism=Escherichia coli, GI1788515, Length=587, Percent_Identity=61.6695059625213, Blast_Score=748, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012159 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 65490; Mature: 65490
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTNRQRYREKVSQMISWGHWFALFNILLALLLGSRYLFIADWPATLAGRIYAIVSWLGH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH FSFLGFAAYLLTLFPLTFIVMSQRLLRFLSAALATAGLTLLLIDSEVFTRFHLHLNPLVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHEEHEEECCEEE ELVINPAQGELSRDWQLMFICVPVLFLIEMLFGTWSWQKLRSLNRQTFGKPLALVFIVSF EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH LASHLIYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLNAQAYQERLIRTGNPEA HHHCEEEEEECCCEECCEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCE LAIEYPLGELSYSDKGAGLNLLVVVADGLRADALPQTMPELAAFSAKNLNFTHHYSTGNA EEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCC IDSGLFGLFYGISPSYLDSILAGRKPSALIDALTHQHYQFGLFSSDGFKAPLYRQALFSD HHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHC FTLPAPQKQSDAATVHQWENWLDTQTSTHPWFAYVNLNGEADGGALSASRYQRSARQLDG CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCH QIAAMIDALRARQVLKNTVVVITGSHGVALDGEDHADADYSRARLQVPLIIHWPGTSPQS HHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCCCCCEEEEEEEEECCCCCHHH IAKMTNHEDIMATLMQRLLHVDSRAANYTQGEDLFAAARSHDWLTLGNGSDLVIVTPQQT HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCCCEEEEECCCEE IVLNRNGTYRAYDRDNRELTGERLQLPLLLQVLTDVKRFIAN EEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVTNRQRYREKVSQMISWGHWFALFNILLALLLGSRYLFIADWPATLAGRIYAIVSWLGH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH FSFLGFAAYLLTLFPLTFIVMSQRLLRFLSAALATAGLTLLLIDSEVFTRFHLHLNPLVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHEEHEEECCEEE ELVINPAQGELSRDWQLMFICVPVLFLIEMLFGTWSWQKLRSLNRQTFGKPLALVFIVSF EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH LASHLIYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLNAQAYQERLIRTGNPEA HHHCEEEEEECCCEECCEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCE LAIEYPLGELSYSDKGAGLNLLVVVADGLRADALPQTMPELAAFSAKNLNFTHHYSTGNA EEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCC IDSGLFGLFYGISPSYLDSILAGRKPSALIDALTHQHYQFGLFSSDGFKAPLYRQALFSD HHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHC FTLPAPQKQSDAATVHQWENWLDTQTSTHPWFAYVNLNGEADGGALSASRYQRSARQLDG CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCH QIAAMIDALRARQVLKNTVVVITGSHGVALDGEDHADADYSRARLQVPLIIHWPGTSPQS HHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCCCCCEEEEEEEEECCCCCHHH IAKMTNHEDIMATLMQRLLHVDSRAANYTQGEDLFAAARSHDWLTLGNGSDLVIVTPQQT HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCCCEEEEECCCEE IVLNRNGTYRAYDRDNRELTGERLQLPLLLQVLTDVKRFIAN EEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]