| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is hisB [H]
Identifier: 238920456
GI number: 238920456
Start: 2459500
End: 2460579
Strand: Direct
Name: hisB [H]
Synonym: NT01EI_2567
Alternate gene names: 238920456
Gene position: 2459500-2460579 (Clockwise)
Preceding gene: 238920455
Following gene: 238920457
Centisome position: 64.51
GC content: 62.78
Gene sequence:
>1080_bases ATGAAGAAATATCTGTTTATCGATCGCGACGGCACCCTGATCGCCGAGCCGCCGCAGGACTTTCAGGTAGACCGTCTGGA CAAGCTGGCGCTGATGCCCGGGGTCATTCCGGCGCTGCTGCGACTGCAGCAGGCCGGCTATCATCTGGTGATGGTCAGTA ATCAGGATGGACTGGGCAGCGAACGCTTTCCGCAGGCCGACTTCGATGCGCCACACGCGCTCATGATGCAGATACTGACC TCGCAGGGCATCCTGTTCGAGCGGGTGCTGATCTGTCCACATCTGCCGCAGGAGGGGTGCCGCTGCCGCAAACCCGCCAC CGGGCTGCTCACCGACTATCTGCAGCCCGGCGTGCTGGATACGGCCAACGCGTGGGTGATCGGCGACCGCGACAGCGATC TGCAGCTGGCGCACAACATGGGGATCAACGGACTGCGCTACGCCGCGACCCCAACCGATGGCGCCAGTCTGGACTGGCCG CAGATTGCCGAACGCCTGACCCGCCGCGATCGCCATGCCCAGGTGGAGCGCGTCACCCGTGAGACCGCGCTGCTGGCGGA AGTGTGGCTGGATCGTCAGGGCGAGAGCTACATCCGTACCGGTATCGGCTTTTTTGATCATATGCTGGATCAGATAGCCA CCCACGCCGGCCTGCGCCTGCATATAGAGGCCAAGGGCGATCTGCATATCGATGATCATCACACCGTCGAAGATACCGCA CTGGCGCTCGGCGAAGCCCTGCGCATCGCCCTGGGGGACAAGCGCGGCATCGCCCGCTTTGGCTTTGTCCTGCCGATGGA CGAGTGTCTGGCCCGCTGTGCCCTGGATATCTCGGGCCGCCCCTACCTCTCCTTCAAGGCCGAATTCAGCCACCAGCGCG TCGGGGATCTCAGCACCGAAATGGTCGGACACTTCTTCCACTCCCTCGCCTACGCGATGGGCGTTACCCTGCACCTGAAA ACCAAGGGTAAGAACGACCACCACCGCGTAGAGAGCCTGTTCAAGGCCTTTGGCCGCACCCTGCGCCAGGCGATCCGCAT CGAAGACGACCGCTTGCCCAGCTCAAAAGGAGTATTGTGA
Upstream 100 bases:
>100_bases CTCGCTGGCCGACTGCCTGCGCATCACCATCGGCAGCACCGTGGAGCATGAGCGGGTTCTTGCGGTACTGCGCCATTTTA GCCAGGAAGGAGAGGCGTAA
Downstream 100 bases:
>100_bases TGGCCACAGCGTGCAACGTGGTGATTCTGGATACCGGCTGCGCCAACCTGGCCTCGGTGCGCTATGCCCTGGAGCGCCTG GGCTGCCGGCCGACCGTCAG
Product: imidazole glycerol-phosphate dehydratase/histidinol phosphatase
Products: NA
Alternate protein names: Histidinol-phosphatase; Imidazoleglycerol-phosphate dehydratase; IGPD [H]
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MKKYLFIDRDGTLIAEPPQDFQVDRLDKLALMPGVIPALLRLQQAGYHLVMVSNQDGLGSERFPQADFDAPHALMMQILT SQGILFERVLICPHLPQEGCRCRKPATGLLTDYLQPGVLDTANAWVIGDRDSDLQLAHNMGINGLRYAATPTDGASLDWP QIAERLTRRDRHAQVERVTRETALLAEVWLDRQGESYIRTGIGFFDHMLDQIATHAGLRLHIEAKGDLHIDDHHTVEDTA LALGEALRIALGDKRGIARFGFVLPMDECLARCALDISGRPYLSFKAEFSHQRVGDLSTEMVGHFFHSLAYAMGVTLHLK TKGKNDHHRVESLFKAFGRTLRQAIRIEDDRLPSSKGVL
Sequences:
>Translated_359_residues MKKYLFIDRDGTLIAEPPQDFQVDRLDKLALMPGVIPALLRLQQAGYHLVMVSNQDGLGSERFPQADFDAPHALMMQILT SQGILFERVLICPHLPQEGCRCRKPATGLLTDYLQPGVLDTANAWVIGDRDSDLQLAHNMGINGLRYAATPTDGASLDWP QIAERLTRRDRHAQVERVTRETALLAEVWLDRQGESYIRTGIGFFDHMLDQIATHAGLRLHIEAKGDLHIDDHHTVEDTA LALGEALRIALGDKRGIARFGFVLPMDECLARCALDISGRPYLSFKAEFSHQRVGDLSTEMVGHFFHSLAYAMGVTLHLK TKGKNDHHRVESLFKAFGRTLRQAIRIEDDRLPSSKGVL >Mature_359_residues MKKYLFIDRDGTLIAEPPQDFQVDRLDKLALMPGVIPALLRLQQAGYHLVMVSNQDGLGSERFPQADFDAPHALMMQILT SQGILFERVLICPHLPQEGCRCRKPATGLLTDYLQPGVLDTANAWVIGDRDSDLQLAHNMGINGLRYAATPTDGASLDWP QIAERLTRRDRHAQVERVTRETALLAEVWLDRQGESYIRTGIGFFDHMLDQIATHAGLRLHIEAKGDLHIDDHHTVEDTA LALGEALRIALGDKRGIARFGFVLPMDECLARCALDISGRPYLSFKAEFSHQRVGDLSTEMVGHFFHSLAYAMGVTLHLK TKGKNDHHRVESLFKAFGRTLRQAIRIEDDRLPSSKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=358, Percent_Identity=73.463687150838, Blast_Score=555, Evalue=1e-159, Organism=Escherichia coli, GI1786399, Length=170, Percent_Identity=31.7647058823529, Blast_Score=81, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6324776, Length=165, Percent_Identity=49.6969696969697, Blast_Score=160, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR020566 - InterPro: IPR005954 - InterPro: IPR006543 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR013954 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD; PF08645 PNK3P [H]
EC number: =3.1.3.15; =4.2.1.19 [H]
Molecular weight: Translated: 40200; Mature: 40200
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYLFIDRDGTLIAEPPQDFQVDRLDKLALMPGVIPALLRLQQAGYHLVMVSNQDGLGS CCCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCC ERFPQADFDAPHALMMQILTSQGILFERVLICPHLPQEGCRCRKPATGLLTDYLQPGVLD CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCC TANAWVIGDRDSDLQLAHNMGINGLRYAATPTDGASLDWPQIAERLTRRDRHAQVERVTR CCCEEEECCCCCCHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ETALLAEVWLDRQGESYIRTGIGFFDHMLDQIATHAGLRLHIEAKGDLHIDDHHTVEDTA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCCCHHHHH LALGEALRIALGDKRGIARFGFVLPMDECLARCALDISGRPYLSFKAEFSHQRVGDLSTE HHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH MVGHFFHSLAYAMGVTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRIEDDRLPSSKGVL HHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKKYLFIDRDGTLIAEPPQDFQVDRLDKLALMPGVIPALLRLQQAGYHLVMVSNQDGLGS CCCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCC ERFPQADFDAPHALMMQILTSQGILFERVLICPHLPQEGCRCRKPATGLLTDYLQPGVLD CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCC TANAWVIGDRDSDLQLAHNMGINGLRYAATPTDGASLDWPQIAERLTRRDRHAQVERVTR CCCEEEECCCCCCHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ETALLAEVWLDRQGESYIRTGIGFFDHMLDQIATHAGLRLHIEAKGDLHIDDHHTVEDTA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCCCHHHHH LALGEALRIALGDKRGIARFGFVLPMDECLARCALDISGRPYLSFKAEFSHQRVGDLSTE HHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH MVGHFFHSLAYAMGVTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRIEDDRLPSSKGVL HHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10222209; 11206551; 11258796 [H]