| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is hisD [H]
Identifier: 238920454
GI number: 238920454
Start: 2457116
End: 2458426
Strand: Direct
Name: hisD [H]
Synonym: NT01EI_2565
Alternate gene names: 238920454
Gene position: 2457116-2458426 (Clockwise)
Preceding gene: 238920453
Following gene: 238920455
Centisome position: 64.45
GC content: 66.97
Gene sequence:
>1311_bases ATGATCCGCTTTGATACGCTTATCCAATGGGACGACTGTAGCCCCGAACAGCAGCACTGCCTGCTACAGCGCCCGGCGAT CGCCAGCGCCGCGCAAATCAGTGCAAACGTTGAGGCGATCATCGCCCAGGTTCGCCACGACGGTGATGCGGCGCTGCATC GCCTCAGCCAACGCTTTGACCGGGAGGCACCTGCCATCCTGCGCGTTTCACGTCAGATCCGCGACGTCGCCGGCGACAGT CTGCCCGACGCACTGACCCGCGCCATGGGCCAGGCGGCCAAGAATATTGAGGTCTTTCATCGCGCCCAGTGCCCGGCCCC TGTCGAGGTCGAAACCCAGCCCGGCGTCTGCTGCCGCCAGATCTCCCGCGCACTGGACACCGTCGGCCTGTATATTCCCG GCGGCAGCGCCCCGTTGCTCTCCACGGTGCTGATGCTGGGGATCCCGGCCCGCGTGGCGCAGTGCCGTAGAGTGATCCTC TGCTCACCACCGCCGATTGACCCGGCGATCCTCTACGCCGCACGCCTGTGCGGCATCGACGAAATTTTTCAGGTCGGCGG CGCGCAAGCAATCGCCGCCATGGCCTTCGGAACCGAATCCGTCCCCCGCGTCGACAAAATCTTTGGCCCCGGAAACGCCT ATGTCACCGAGGCCAAACGGCAGGTCAGCCAAAGCCCTCGGGGCGCCGCCATCGATATGCCCGCCGGCCCCTCCGAGGTG CTGGTGATCGCCGATTCCGGAGCCAACCCGGAGTTTATCGCCGCCGATCTGCTCTCCCAGGCGGAGCATGGCCCCGACTC ACAGGTGCTCCTGCTGACGCCCGATGCCCCGCTGGCCCGCCGGGTCGCCGAACGGGTCAAGGCGCAGCTTGCCCTCCTGC CACGCGCTGACATCGCCCGCCAGGCGCTGGCGCAGAGCCGCCTGATCGTCACCCGTTCGCTGGCGCAGTGCATCGAGATC AGCAACCGCTATGGGCCGGAGCACCTCATCATTCAAACCCGCGACGCCGAGGCGTGGCTCGATGCCATCACCAGCGCTGG CTCCGTGTTTCTGGGCGACTGGTCGCCCGAATCCGCGGGGGACTATGCCTCCGGCACCAATCACGTGCTGCCGACCTACG GCTACACCGCCACCCACTCCAGTCTGGGGCTGGCAGATTTCCAGAAACGCATGACCGTCCAACGCCTCAGCCCCGCAGGC CTGCTGACGCTGGCCCCGACGGTCGAGGCCATGGCGCAGGCTGAGTGCCTTGACGCCCACGCCAACGCCGTCCGCCTGCG GGTCGCCGCCATCCGGGAGAGCCAATCATGA
Upstream 100 bases:
>100_bases AGCAGCGAAACCCTGTTCTGGGAAACCATGGAGCAGCTCAAGGCTCTGGGGGCCAGCTCGATCCTGGTACTGCCGATTGA AAAGATGATGGAGTGACGCC
Downstream 100 bases:
>100_bases AGCCGATAACCGCACTGGCGCGGGAAAACATACAGCGCCTGACCCCCTACCAGTCCGCCCGACGCCTCGGTGGCAGCGGC GACGTCTGGCTCAATGCCAA
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MIRFDTLIQWDDCSPEQQHCLLQRPAIASAAQISANVEAIIAQVRHDGDAALHRLSQRFDREAPAILRVSRQIRDVAGDS LPDALTRAMGQAAKNIEVFHRAQCPAPVEVETQPGVCCRQISRALDTVGLYIPGGSAPLLSTVLMLGIPARVAQCRRVIL CSPPPIDPAILYAARLCGIDEIFQVGGAQAIAAMAFGTESVPRVDKIFGPGNAYVTEAKRQVSQSPRGAAIDMPAGPSEV LVIADSGANPEFIAADLLSQAEHGPDSQVLLLTPDAPLARRVAERVKAQLALLPRADIARQALAQSRLIVTRSLAQCIEI SNRYGPEHLIIQTRDAEAWLDAITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATHSSLGLADFQKRMTVQRLSPAG LLTLAPTVEAMAQAECLDAHANAVRLRVAAIRESQS
Sequences:
>Translated_436_residues MIRFDTLIQWDDCSPEQQHCLLQRPAIASAAQISANVEAIIAQVRHDGDAALHRLSQRFDREAPAILRVSRQIRDVAGDS LPDALTRAMGQAAKNIEVFHRAQCPAPVEVETQPGVCCRQISRALDTVGLYIPGGSAPLLSTVLMLGIPARVAQCRRVIL CSPPPIDPAILYAARLCGIDEIFQVGGAQAIAAMAFGTESVPRVDKIFGPGNAYVTEAKRQVSQSPRGAAIDMPAGPSEV LVIADSGANPEFIAADLLSQAEHGPDSQVLLLTPDAPLARRVAERVKAQLALLPRADIARQALAQSRLIVTRSLAQCIEI SNRYGPEHLIIQTRDAEAWLDAITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATHSSLGLADFQKRMTVQRLSPAG LLTLAPTVEAMAQAECLDAHANAVRLRVAAIRESQS >Mature_436_residues MIRFDTLIQWDDCSPEQQHCLLQRPAIASAAQISANVEAIIAQVRHDGDAALHRLSQRFDREAPAILRVSRQIRDVAGDS LPDALTRAMGQAAKNIEVFHRAQCPAPVEVETQPGVCCRQISRALDTVGLYIPGGSAPLLSTVLMLGIPARVAQCRRVIL CSPPPIDPAILYAARLCGIDEIFQVGGAQAIAAMAFGTESVPRVDKIFGPGNAYVTEAKRQVSQSPRGAAIDMPAGPSEV LVIADSGANPEFIAADLLSQAEHGPDSQVLLLTPDAPLARRVAERVKAQLALLPRADIARQALAQSRLIVTRSLAQCIEI SNRYGPEHLIIQTRDAEAWLDAITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATHSSLGLADFQKRMTVQRLSPAG LLTLAPTVEAMAQAECLDAHANAVRLRVAAIRESQS
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=432, Percent_Identity=67.5925925925926, Blast_Score=593, Evalue=1e-171, Organism=Saccharomyces cerevisiae, GI6319819, Length=419, Percent_Identity=44.1527446300716, Blast_Score=360, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46613; Mature: 46613
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFDTLIQWDDCSPEQQHCLLQRPAIASAAQISANVEAIIAQVRHDGDAALHRLSQRFD CCEECCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC REAPAILRVSRQIRDVAGDSLPDALTRAMGQAAKNIEVFHRAQCPAPVEVETQPGVCCRQ CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHH ISRALDTVGLYIPGGSAPLLSTVLMLGIPARVAQCRRVILCSPPPIDPAILYAARLCGID HHHHHHHCEEEECCCCCHHHHHHHHHCCCHHHHHCCEEEEECCCCCCHHHHHHHHHCCHH EIFQVGGAQAIAAMAFGTESVPRVDKIFGPGNAYVTEAKRQVSQSPRGAAIDMPAGPSEV HHHHCCCHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCE LVIADSGANPEFIAADLLSQAEHGPDSQVLLLTPDAPLARRVAERVKAQLALLPRADIAR EEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHH QALAQSRLIVTRSLAQCIEISNRYGPEHLIIQTRDAEAWLDAITSAGSVFLGDWSPESAG HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCCC DYASGTNHVLPTYGYTATHSSLGLADFQKRMTVQRLSPAGLLTLAPTVEAMAQAECLDAH CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHH ANAVRLRVAAIRESQS HHHHEEHHHHHHCCCC >Mature Secondary Structure MIRFDTLIQWDDCSPEQQHCLLQRPAIASAAQISANVEAIIAQVRHDGDAALHRLSQRFD CCEECCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC REAPAILRVSRQIRDVAGDSLPDALTRAMGQAAKNIEVFHRAQCPAPVEVETQPGVCCRQ CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHH ISRALDTVGLYIPGGSAPLLSTVLMLGIPARVAQCRRVILCSPPPIDPAILYAARLCGID HHHHHHHCEEEECCCCCHHHHHHHHHCCCHHHHHCCEEEEECCCCCCHHHHHHHHHCCHH EIFQVGGAQAIAAMAFGTESVPRVDKIFGPGNAYVTEAKRQVSQSPRGAAIDMPAGPSEV HHHHCCCHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCE LVIADSGANPEFIAADLLSQAEHGPDSQVLLLTPDAPLARRVAERVKAQLALLPRADIAR EEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHH QALAQSRLIVTRSLAQCIEISNRYGPEHLIIQTRDAEAWLDAITSAGSVFLGDWSPESAG HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCCC DYASGTNHVLPTYGYTATHSSLGLADFQKRMTVQRLSPAGLLTLAPTVEAMAQAECLDAH CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHH ANAVRLRVAAIRESQS HHHHEEHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA