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The map label for this gene is ybjT [H]

Identifier: 238920397

GI number: 238920397

Start: 2407419

End: 2408948

Strand: Direct

Name: ybjT [H]

Synonym: NT01EI_2507

Alternate gene names: 238920397

Gene position: 2407419-2408948 (Clockwise)

Preceding gene: 238920396

Following gene: 238920399

Centisome position: 63.15

GC content: 64.64

Gene sequence:

>1530_bases
ATGCGCGGATTGCGTATTCTGGTATTAGGCGCCAGCGGCTACATCGGCCAACATCTGATCCCCCAACTGTGCGCCCAGGG
GCATCATGTGCGCGCCGCTGCGCGCCGTATTCGCTGGCTGCAAGAGCGTAACTGGCCCGGCGTCGAATGTCAGTATGTCG
ATCTCTACCAGCCGCAGAGCCTGAGCACGGCGCTGGATGGCATCGATCTGGTCTACTATCTGGTGCATGCCATGAGGGAC
GGCGATGACTTCGTACGCGCCGAGCTCCAGGCGGCGCAAAACGTCAGCCGCGCGTTGAGCATCTCACGCGTCCAGCAGGT
GATCTTTCTCGGGGCGCTGCAGCCACCCGACGATCCTTCACGTCACCTGGCCGCACGGCGTGAGACCGGCGAAATCCTAC
GCACCAGCGGAGTGCCGGTCACCGAGGTCCGCTCCGGGATCGTCATCGGACCCGGCTCCGCGGCCTTCGAGGTGATGCGT
GACATGGTCTATAATCTGGCCATCCTGACGCCGCCGCTCTGGGTGCGCTCCAAAAGCGCGCCCATCGCGCTGGAGAACCT
GCTGACCTACCTCTGCGCGCTGGCGAGTCTGCCGGACAGCGACAACCGGGTGTTCGAAGTCGCCGGCCCCGAATACATCA
GCTATCAGACCATGTTCGAGCGCTTTATCCGCGTCAGCGGCAAGCGGCGCTGGATGATCCCGTTGCCGATCCCCACCCGG
TTGATCTCGGTCTATTTCCTGCACCTGATCACCTCCGTTCCCACCAGCATCGCCCGCGCGCTGATCGAAGGGCTAAAGCA
CGATCTCCCGGCCGACGATGCGGCGATCACCCAGTTGATCCCGCAGACGCTGATCGGCTTTGATCGCGCGCTGAGCGACA
CTCTTGCCCGCGAGCGCGAGGTGGTCGACTGCGCCGATTGGGGCTACGACACCCAGGCGCTGGCCCGTTGGCGGCCGGGC
TACGGTTTCTACCCTAAACAGGCGGGGTGCCAAATCGAGACCTCCGCCTCGCGCCGGGCGCTGTGGCATGTGGTACAACA
GATCGGCGGCGACAATGGCTACTTCTTTGCCAACCCGCTGTGGCAGATCCGCGCCCGCCTTGACGATCTCACCGGCAACC
GGATCACCTATGGCCGTCCGGCGCGCCAAACCTTGCAGATAGGCGATCTCATCGACGGCTGGAGAGTGATCGCCCTGCGG
CCCGGGCATCAGTTGACCCTGCTGTTTGGGATGAAGGCACCGGGGCTGGGACGTCTCAGCTTCACCCTGGACGAGCACAA
CGGCCTACGCACACTGGACGTACGCGCCTGGTGGCATCCCGCCGGTTTTTCCGGCCTGCTGTACTGGTTTGCCATGATGC
CAGCGCACCTGTTTATCTTTCGCGGCATGGCACGGCGCATCGTCGAGCTGGCCGAAGCCTGGGACGATGCCCAGCCGACG
CCGGGCAGCGATAGCCGCAGCGCGACGCTTGACGGCACACCAGGCGCCTCTGAAGTGGCCAGGGGGGCGGGCAACGCCCC
CGGTGAGTAA

Upstream 100 bases:

>100_bases
GATCGCCCTGTGGCACACCTTCCGTCAGGCGTATCGTCCGGCGAACGGCGCGGTGCCGGCCCCAACCCCTTACGGCTAAT
TGATTCCCTGCGAGGTGTGC

Downstream 100 bases:

>100_bases
GTCAAGTGGATAGGCAGGCACAGACCCGGTAGCCGCCACTCCTGAGCCTGCTGTCGCAGGCGCGAAAGCAGGCTCACCGT
TTTAGGTCATCCCCGTGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MRGLRILVLGASGYIGQHLIPQLCAQGHHVRAAARRIRWLQERNWPGVECQYVDLYQPQSLSTALDGIDLVYYLVHAMRD
GDDFVRAELQAAQNVSRALSISRVQQVIFLGALQPPDDPSRHLAARRETGEILRTSGVPVTEVRSGIVIGPGSAAFEVMR
DMVYNLAILTPPLWVRSKSAPIALENLLTYLCALASLPDSDNRVFEVAGPEYISYQTMFERFIRVSGKRRWMIPLPIPTR
LISVYFLHLITSVPTSIARALIEGLKHDLPADDAAITQLIPQTLIGFDRALSDTLAREREVVDCADWGYDTQALARWRPG
YGFYPKQAGCQIETSASRRALWHVVQQIGGDNGYFFANPLWQIRARLDDLTGNRITYGRPARQTLQIGDLIDGWRVIALR
PGHQLTLLFGMKAPGLGRLSFTLDEHNGLRTLDVRAWWHPAGFSGLLYWFAMMPAHLFIFRGMARRIVELAEAWDDAQPT
PGSDSRSATLDGTPGASEVARGAGNAPGE

Sequences:

>Translated_509_residues
MRGLRILVLGASGYIGQHLIPQLCAQGHHVRAAARRIRWLQERNWPGVECQYVDLYQPQSLSTALDGIDLVYYLVHAMRD
GDDFVRAELQAAQNVSRALSISRVQQVIFLGALQPPDDPSRHLAARRETGEILRTSGVPVTEVRSGIVIGPGSAAFEVMR
DMVYNLAILTPPLWVRSKSAPIALENLLTYLCALASLPDSDNRVFEVAGPEYISYQTMFERFIRVSGKRRWMIPLPIPTR
LISVYFLHLITSVPTSIARALIEGLKHDLPADDAAITQLIPQTLIGFDRALSDTLAREREVVDCADWGYDTQALARWRPG
YGFYPKQAGCQIETSASRRALWHVVQQIGGDNGYFFANPLWQIRARLDDLTGNRITYGRPARQTLQIGDLIDGWRVIALR
PGHQLTLLFGMKAPGLGRLSFTLDEHNGLRTLDVRAWWHPAGFSGLLYWFAMMPAHLFIFRGMARRIVELAEAWDDAQPT
PGSDSRSATLDGTPGASEVARGAGNAPGE
>Mature_509_residues
MRGLRILVLGASGYIGQHLIPQLCAQGHHVRAAARRIRWLQERNWPGVECQYVDLYQPQSLSTALDGIDLVYYLVHAMRD
GDDFVRAELQAAQNVSRALSISRVQQVIFLGALQPPDDPSRHLAARRETGEILRTSGVPVTEVRSGIVIGPGSAAFEVMR
DMVYNLAILTPPLWVRSKSAPIALENLLTYLCALASLPDSDNRVFEVAGPEYISYQTMFERFIRVSGKRRWMIPLPIPTR
LISVYFLHLITSVPTSIARALIEGLKHDLPADDAAITQLIPQTLIGFDRALSDTLAREREVVDCADWGYDTQALARWRPG
YGFYPKQAGCQIETSASRRALWHVVQQIGGDNGYFFANPLWQIRARLDDLTGNRITYGRPARQTLQIGDLIDGWRVIALR
PGHQLTLLFGMKAPGLGRLSFTLDEHNGLRTLDVRAWWHPAGFSGLLYWFAMMPAHLFIFRGMARRIVELAEAWDDAQPT
PGSDSRSATLDGTPGASEVARGAGNAPGE

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=473, Percent_Identity=59.6194503171247, Blast_Score=572, Evalue=1e-164,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 56641; Mature: 56641

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLRILVLGASGYIGQHLIPQLCAQGHHVRAAARRIRWLQERNWPGVECQYVDLYQPQS
CCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCH
LSTALDGIDLVYYLVHAMRDGDDFVRAELQAAQNVSRALSISRVQQVIFLGALQPPDDPS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
RHLAARRETGEILRTSGVPVTEVRSGIVIGPGSAAFEVMRDMVYNLAILTPPLWVRSKSA
HHHHHHHHHHHHHHCCCCCHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCCCCEECCCCC
PIALENLLTYLCALASLPDSDNRVFEVAGPEYISYQTMFERFIRVSGKRRWMIPLPIPTR
CHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHH
LISVYFLHLITSVPTSIARALIEGLKHDLPADDAAITQLIPQTLIGFDRALSDTLARERE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VVDCADWGYDTQALARWRPGYGFYPKQAGCQIETSASRRALWHVVQQIGGDNGYFFANPL
HHHHHCCCCCHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCEEECCHH
WQIRARLDDLTGNRITYGRPARQTLQIGDLIDGWRVIALRPGHQLTLLFGMKAPGLGRLS
HHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCEEE
FTLDEHNGLRTLDVRAWWHPAGFSGLLYWFAMMPAHLFIFRGMARRIVELAEAWDDAQPT
EEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PGSDSRSATLDGTPGASEVARGAGNAPGE
CCCCCCCEECCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MRGLRILVLGASGYIGQHLIPQLCAQGHHVRAAARRIRWLQERNWPGVECQYVDLYQPQS
CCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCH
LSTALDGIDLVYYLVHAMRDGDDFVRAELQAAQNVSRALSISRVQQVIFLGALQPPDDPS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
RHLAARRETGEILRTSGVPVTEVRSGIVIGPGSAAFEVMRDMVYNLAILTPPLWVRSKSA
HHHHHHHHHHHHHHCCCCCHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCCCCEECCCCC
PIALENLLTYLCALASLPDSDNRVFEVAGPEYISYQTMFERFIRVSGKRRWMIPLPIPTR
CHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHH
LISVYFLHLITSVPTSIARALIEGLKHDLPADDAAITQLIPQTLIGFDRALSDTLARERE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VVDCADWGYDTQALARWRPGYGFYPKQAGCQIETSASRRALWHVVQQIGGDNGYFFANPL
HHHHHCCCCCHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCEEECCHH
WQIRARLDDLTGNRITYGRPARQTLQIGDLIDGWRVIALRPGHQLTLLFGMKAPGLGRLS
HHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCEEE
FTLDEHNGLRTLDVRAWWHPAGFSGLLYWFAMMPAHLFIFRGMARRIVELAEAWDDAQPT
EEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PGSDSRSATLDGTPGASEVARGAGNAPGE
CCCCCCCEECCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]