| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is aroA
Identifier: 238920347
GI number: 238920347
Start: 2348917
End: 2350203
Strand: Reverse
Name: aroA
Synonym: NT01EI_2457
Alternate gene names: 238920347
Gene position: 2350203-2348917 (Counterclockwise)
Preceding gene: 238920348
Following gene: 238920346
Centisome position: 61.65
GC content: 63.25
Gene sequence:
>1287_bases ATGTCGTCCGCCCTGACGTTACAACCCGTGCGCCGCTTTAGCGGCGAGATTAATCTGCCCGGCTCGAAAAGCGTTTCCAA CCGCGCCCTGCTCCTGGCAGCGCAGGCCCGCGGCGTAACGCGGCTGCATAACCTGCTCGACAGCGACGATGTGCGCTACA TGCTCGATGCCCTTAAGGCGCTGGGCGTGCGCTATCAGCTGTCGGACTGCCGCACCCGCTGCGAGGTGCAGGGACTCGGG GGGACGCTGAGCGCCCACGGCGCGCTGACGCTGTTTCTGGGCAATGCCGGCACGGCGATGCGCCCGCTGGCGGCGGCGCT CAGCCTGGGGCTACGCGATGTGATCCTGACCGGGGAGCCGCGCATGAAGGAGCGTCCGATCGCGCATCTGGTGACCGCCC TGCGTCAGGGCGGTGCGCAGGTTGACTATCTGGAGAGCGATGGCTATCCGCCCGTACGTCTGCACGGCGGTTTTAACGGC GGAGAGATCAGCGTTGACGGCTCGGTCTCCAGCCAGTTTCTGACCGCGCTGCTGATGGCGGCGCCGATGGCGGCAGAGGA GACCCGTATCACCATTCTGGGAGAGCTGGTTTCCAAGCCCTATATCGCCATTACGCTGGCGATGATGCGGGCGTTCGGCG TGGAGGTGGAGAATCACGCGTATCGCCATTTCGTGGTGCGGGGGGGGCAGGTCTATCAGGCTCCGAGCGACTATCTGGTC GAAGGAGATGCATCCTCGGCGTCGTACTTTCTGGCCGGCGCAGCGATCGCCGGCGGTACCGTCCGGGTGACCGGAATTGG GCGCCACAGCATGCAGGGGGATATTCACTTTGCCGATGTGCTGGAAAAAATGGGGGCGCAGGTCGAATGGGGGAATGACT ATATCGCCTGCACCCGGGATAGCCTGCACGGCATCGATATGGATATGAATGCGATCCCCGATGCGGCGATGACCATCGCC ACCACCGCGCTGTTTGCCAAAGGGCCGACGACTCTGCGCAATATTTACAATTGGCGTGTCAAGGAGACCGATCGCCTGGC GGCAATGGCCAGTGAGCTGCGTAAGGTGGGTGCTGTGGTCGAGGAGGGGACGGACTTTCTGCGCATTGAGCCGCCCGCGC AGCTGCAGGCGGCGCAGATTGCCACCTACAACGATCACCGCATGGCCATGTGTTTTTCACTGGTGGCGTTGTCGGGCACG CCGGTGACCATCTGTGACCCCGGTTGTACCGCAAAAACCTTTCCCGATTACTTTCGCCAGTTCTCCGCGCTGTGCCATCC GCGCTAA
Upstream 100 bases:
>100_bases TCGCATAGTGACAGCGTTCAACAAAAACGGTACAAAAATACCCTTAACAGGAAGCGCGGCCATGATGGCAGCGCTGTTTG CCCAGCAGGAGTGATTTAGC
Downstream 100 bases:
>100_bases GCCGCATTAGGATTTTATCTGTAAAGCCGGCGTAGACGTACGCCGGCTTTTTGCTATCCGATTGCACCGCCCTGCAGTGC AGGCAATCGTTTGGGGTTCG
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSSALTLQPVRRFSGEINLPGSKSVSNRALLLAAQARGVTRLHNLLDSDDVRYMLDALKALGVRYQLSDCRTRCEVQGLG GTLSAHGALTLFLGNAGTAMRPLAAALSLGLRDVILTGEPRMKERPIAHLVTALRQGGAQVDYLESDGYPPVRLHGGFNG GEISVDGSVSSQFLTALLMAAPMAAEETRITILGELVSKPYIAITLAMMRAFGVEVENHAYRHFVVRGGQVYQAPSDYLV EGDASSASYFLAGAAIAGGTVRVTGIGRHSMQGDIHFADVLEKMGAQVEWGNDYIACTRDSLHGIDMDMNAIPDAAMTIA TTALFAKGPTTLRNIYNWRVKETDRLAAMASELRKVGAVVEEGTDFLRIEPPAQLQAAQIATYNDHRMAMCFSLVALSGT PVTICDPGCTAKTFPDYFRQFSALCHPR
Sequences:
>Translated_428_residues MSSALTLQPVRRFSGEINLPGSKSVSNRALLLAAQARGVTRLHNLLDSDDVRYMLDALKALGVRYQLSDCRTRCEVQGLG GTLSAHGALTLFLGNAGTAMRPLAAALSLGLRDVILTGEPRMKERPIAHLVTALRQGGAQVDYLESDGYPPVRLHGGFNG GEISVDGSVSSQFLTALLMAAPMAAEETRITILGELVSKPYIAITLAMMRAFGVEVENHAYRHFVVRGGQVYQAPSDYLV EGDASSASYFLAGAAIAGGTVRVTGIGRHSMQGDIHFADVLEKMGAQVEWGNDYIACTRDSLHGIDMDMNAIPDAAMTIA TTALFAKGPTTLRNIYNWRVKETDRLAAMASELRKVGAVVEEGTDFLRIEPPAQLQAAQIATYNDHRMAMCFSLVALSGT PVTICDPGCTAKTFPDYFRQFSALCHPR >Mature_427_residues SSALTLQPVRRFSGEINLPGSKSVSNRALLLAAQARGVTRLHNLLDSDDVRYMLDALKALGVRYQLSDCRTRCEVQGLGG TLSAHGALTLFLGNAGTAMRPLAAALSLGLRDVILTGEPRMKERPIAHLVTALRQGGAQVDYLESDGYPPVRLHGGFNGG EISVDGSVSSQFLTALLMAAPMAAEETRITILGELVSKPYIAITLAMMRAFGVEVENHAYRHFVVRGGQVYQAPSDYLVE GDASSASYFLAGAAIAGGTVRVTGIGRHSMQGDIHFADVLEKMGAQVEWGNDYIACTRDSLHGIDMDMNAIPDAAMTIAT TALFAKGPTTLRNIYNWRVKETDRLAAMASELRKVGAVVEEGTDFLRIEPPAQLQAAQIATYNDHRMAMCFSLVALSGTP VTICDPGCTAKTFPDYFRQFSALCHPR
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=423, Percent_Identity=74.7044917257683, Blast_Score=634, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6320332, Length=443, Percent_Identity=36.7945823927765, Blast_Score=249, Evalue=6e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_EDWI9 (Q9X4H2)
Other databases:
- EMBL: AF110153 - EMBL: CP001600 - RefSeq: YP_002933862.1 - ProteinModelPortal: Q9X4H2 - SMR: Q9X4H2 - GeneID: 7959189 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_2457 - OMA: GADIEWG - ProtClustDB: CLSK2813323 - BRENDA: 2.5.1.19 - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 46054; Mature: 45923
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSALTLQPVRRFSGEINLPGSKSVSNRALLLAAQARGVTRLHNLLDSDDVRYMLDALKA CCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHH LGVRYQLSDCRTRCEVQGLGGTLSAHGALTLFLGNAGTAMRPLAAALSLGLRDVILTGEP HCCEEEHHHHHCEEEEECCCCEEECCCEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCC RMKERPIAHLVTALRQGGAQVDYLESDGYPPVRLHGGFNGGEISVDGSVSSQFLTALLMA CCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCEEEECCCHHHHHHHHHHHH APMAAEETRITILGELVSKPYIAITLAMMRAFGVEVENHAYRHFVVRGGQVYQAPSDYLV CCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEECCCCCEE EGDASSASYFLAGAAIAGGTVRVTGIGRHSMQGDIHFADVLEKMGAQVEWGNDYIACTRD ECCCCCCEEEEEEHEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCEEEECCCEEEEECC SLHGIDMDMNAIPDAAMTIATTALFAKGPTTLRNIYNWRVKETDRLAAMASELRKVGAVV CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EEGTDFLRIEPPAQLQAAQIATYNDHRMAMCFSLVALSGTPVTICDPGCTAKTFPDYFRQ HCCCCEEEECCCCCCCHHEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHH FSALCHPR HHHHCCCC >Mature Secondary Structure SSALTLQPVRRFSGEINLPGSKSVSNRALLLAAQARGVTRLHNLLDSDDVRYMLDALKA CCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHH LGVRYQLSDCRTRCEVQGLGGTLSAHGALTLFLGNAGTAMRPLAAALSLGLRDVILTGEP HCCEEEHHHHHCEEEEECCCCEEECCCEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCC RMKERPIAHLVTALRQGGAQVDYLESDGYPPVRLHGGFNGGEISVDGSVSSQFLTALLMA CCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCEEEECCCHHHHHHHHHHHH APMAAEETRITILGELVSKPYIAITLAMMRAFGVEVENHAYRHFVVRGGQVYQAPSDYLV CCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEECCCCCEE EGDASSASYFLAGAAIAGGTVRVTGIGRHSMQGDIHFADVLEKMGAQVEWGNDYIACTRD ECCCCCCEEEEEEHEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCEEEECCCEEEEECC SLHGIDMDMNAIPDAAMTIATTALFAKGPTTLRNIYNWRVKETDRLAAMASELRKVGAVV CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EEGTDFLRIEPPAQLQAAQIATYNDHRMAMCFSLVALSGTPVTICDPGCTAKTFPDYFRQ HCCCCEEEECCCCCCCHHEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHH FSALCHPR HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA