| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238920248
Identifier: 238920248
GI number: 238920248
Start: 2260594
End: 2260818
Strand: Direct
Name: 238920248
Synonym: NT01EI_2357
Alternate gene names: NA
Gene position: 2260594-2260818 (Clockwise)
Preceding gene: 238920244
Following gene: 238920251
Centisome position: 59.3
GC content: 48.89
Gene sequence:
>225_bases TTGGGGCGGCAGAAGTGGCTGTCAGGATTTCCAGAGCTGCTTACTGATGATTTTTCGTGTCATGCCTACTATATGGGGAT TGATGTTATTCGAATCAACTCGGTTTTGTTAGCGGCTCTAAATCTATCCGGCGTCACTATGGGCATGGATGCCCGCACCA CGATGAGTTCCGCGCCTGATGAACCTAAAAAGCCCCTCGGCTTCAGTGAGCCATTTTTTGTATGA
Upstream 100 bases:
>100_bases GCAAGTCCTCCCAGGGTATCCCAGCCGTAAGGACAAACAGAATACCGTTGAGAACGGCATAGTCATCAAGGCGTGGGCGG CCACCCCGTGACGAAGGCTG
Downstream 100 bases:
>100_bases GGTTTCTCATCAGGCCGATATGCCGTTCATGTCATCAATAATCAGTCTTCGCAAAACCGGATGGGTAACTGCTATTTAAC TACTTAATAATCAACCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MGRQKWLSGFPELLTDDFSCHAYYMGIDVIRINSVLLAALNLSGVTMGMDARTTMSSAPDEPKKPLGFSEPFFV
Sequences:
>Translated_74_residues MGRQKWLSGFPELLTDDFSCHAYYMGIDVIRINSVLLAALNLSGVTMGMDARTTMSSAPDEPKKPLGFSEPFFV >Mature_73_residues GRQKWLSGFPELLTDDFSCHAYYMGIDVIRINSVLLAALNLSGVTMGMDARTTMSSAPDEPKKPLGFSEPFFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8174; Mature: 8042
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRQKWLSGFPELLTDDFSCHAYYMGIDVIRINSVLLAALNLSGVTMGMDARTTMSSAPD CCCCCHHCCCHHHHCCCCCCEEEEECEEEEEHHHHHHHHHCCCCEEECCCCCCCCCCCCC EPKKPLGFSEPFFV CCCCCCCCCCCCCC >Mature Secondary Structure GRQKWLSGFPELLTDDFSCHAYYMGIDVIRINSVLLAALNLSGVTMGMDARTTMSSAPD CCCCHHCCCHHHHCCCCCCEEEEECEEEEEHHHHHHHHHCCCCEEECCCCCCCCCCCCC EPKKPLGFSEPFFV CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA