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The map label for this gene is yciS [H]

Identifier: 238920242

GI number: 238920242

Start: 2246048

End: 2246356

Strand: Reverse

Name: yciS [H]

Synonym: NT01EI_2351

Alternate gene names: 238920242

Gene position: 2246356-2246048 (Counterclockwise)

Preceding gene: 238920243

Following gene: 238920241

Centisome position: 58.92

GC content: 56.63

Gene sequence:

>309_bases
GTGAAATATTTGCTGATTTTTCTGATCGTCCTGGCCTGTTTTGTATTGTCAGTCACTCTGGGTGCGCAAAATGATCAGGT
CGTGGCCTTCAACTATCTGTTGGCCAAGGGCGAGTATCGTCTTTCGACTCTGCTGGCGACGCTGTTTGCTGCCGGTTTTA
TCCTTGGCTGGGTGATCTGTGGCCTGTTCTATCTGCGAGTACGCCTGGGACTGGCGCGGGCGCAGCGTAAAATTCGCCGG
TTGGAACAGCAGCTGACGTCGGCGCCGCCGCAGGGCAGCAGCACCGCGGCTCCGGCTGCGAAGGAATAA

Upstream 100 bases:

>100_bases
CGGGCGGGGTTTCCATGCCCCATGAGTAAATGTTAATTTAGAGGTGGTTTCGATTTTTTAAGCATTATTCATTTGCTTAA
CCTGAACAACAGGAAGAAAT

Downstream 100 bases:

>100_bases
CCGCTATGCTTGAGCTGCTGTTTCTGCTTCTCCCGGTAGCGGCTGCCTATGGCTGGTATATGGGGCGAAGGAGCGCACAG
CAGGATAAACAGCAGGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MKYLLIFLIVLACFVLSVTLGAQNDQVVAFNYLLAKGEYRLSTLLATLFAAGFILGWVICGLFYLRVRLGLARAQRKIRR
LEQQLTSAPPQGSSTAAPAAKE

Sequences:

>Translated_102_residues
MKYLLIFLIVLACFVLSVTLGAQNDQVVAFNYLLAKGEYRLSTLLATLFAAGFILGWVICGLFYLRVRLGLARAQRKIRR
LEQQLTSAPPQGSSTAAPAAKE
>Mature_102_residues
MKYLLIFLIVLACFVLSVTLGAQNDQVVAFNYLLAKGEYRLSTLLATLFAAGFILGWVICGLFYLRVRLGLARAQRKIRR
LEQQLTSAPPQGSSTAAPAAKE

Specific function: Unknown

COG id: COG3771

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1222 [H]

Homologues:

Organism=Escherichia coli, GI1787535, Length=102, Percent_Identity=71.5686274509804, Blast_Score=147, Evalue=9e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010445 [H]

Pfam domain/function: PF06305 DUF1049 [H]

EC number: NA

Molecular weight: Translated: 11220; Mature: 11220

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLLIFLIVLACFVLSVTLGAQNDQVVAFNYLLAKGEYRLSTLLATLFAAGFILGWVIC
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
GLFYLRVRLGLARAQRKIRRLEQQLTSAPPQGSSTAAPAAKE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKYLLIFLIVLACFVLSVTLGAQNDQVVAFNYLLAKGEYRLSTLLATLFAAGFILGWVIC
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
GLFYLRVRLGLARAQRKIRRLEQQLTSAPPQGSSTAAPAAKE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]