| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is dinI [H]
Identifier: 238920230
GI number: 238920230
Start: 2238738
End: 2238986
Strand: Direct
Name: dinI [H]
Synonym: NT01EI_2339
Alternate gene names: 238920230
Gene position: 2238738-2238986 (Clockwise)
Preceding gene: 238920229
Following gene: 238920231
Centisome position: 58.72
GC content: 63.45
Gene sequence:
>249_bases ATGCGCATCGAACTGACGTTGGACAAGCGCAACCCTCTGCCTCCGGGGGCGCTTGACGCCTTCCATCAGGAATTTTCCCG CCGCATCCAGCGCCGCTACCCCGACTGCGCGGTACAGGTGCGTCAGTCCGGCGCCAATGGCCTGAGCGTACTGGGCGGCA TCAAGAGCGATCGGGAGATCGTCGAAACCATCCTGCAGGAGACCTGGGAAAGCGCCGACGACTGGTTCTCTCCCGACTAT CCCGGGTAG
Upstream 100 bases:
>100_bases ATCCGCTGATCCTGCCACGCAGAAAAATCCCGGGCGCCCCTTGCAACCCTGGGACAATAGCTGTATATATTTACAGTAAA TCACTCATAGGGAGTTACCC
Downstream 100 bases:
>100_bases CAGCGCCGTTCACCGCACAGAAAAAGCATGCTGGGTGGACCAGAGGTGCATATACTGAGAAAGCGCACAGTATGCGTTTA TTGATCCTGGTGAGTAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MRIELTLDKRNPLPPGALDAFHQEFSRRIQRRYPDCAVQVRQSGANGLSVLGGIKSDREIVETILQETWESADDWFSPDY PG
Sequences:
>Translated_82_residues MRIELTLDKRNPLPPGALDAFHQEFSRRIQRRYPDCAVQVRQSGANGLSVLGGIKSDREIVETILQETWESADDWFSPDY PG >Mature_82_residues MRIELTLDKRNPLPPGALDAFHQEFSRRIQRRYPDCAVQVRQSGANGLSVLGGIKSDREIVETILQETWESADDWFSPDY PG
Specific function: Involved in SOS regulation. Inhibits recA by preventing recA to bind ssDNA. Can displace ssDNA from recA. Inhibits nucA transcription [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dinI family [H]
Homologues:
Organism=Escherichia coli, GI1787300, Length=78, Percent_Identity=57.6923076923077, Blast_Score=93, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010391 [H]
Pfam domain/function: PF06183 DinI [H]
EC number: NA
Molecular weight: Translated: 9346; Mature: 9346
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIELTLDKRNPLPPGALDAFHQEFSRRIQRRYPDCAVQVRQSGANGLSVLGGIKSDREI CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCCCCCHHH VETILQETWESADDWFSPDYPG HHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRIELTLDKRNPLPPGALDAFHQEFSRRIQRRYPDCAVQVRQSGANGLSVLGGIKSDREI CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCCCCCHHH VETILQETWESADDWFSPDYPG HHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11727040 [H]