Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920156

Identifier: 238920156

GI number: 238920156

Start: 2169956

End: 2171110

Strand: Direct

Name: 238920156

Synonym: NT01EI_2262

Alternate gene names: NA

Gene position: 2169956-2171110 (Clockwise)

Preceding gene: 238920155

Following gene: 238920157

Centisome position: 56.92

GC content: 59.22

Gene sequence:

>1155_bases
ATGGTTTGGCCCAGTGTCACGATTACCCAGCTGAACACGTTCGGCGGCGTCACCAGGTCCATCGAGCGCACCGTGCTGTT
TGTCGGGACTGCCAGTATGAACTATGAAGCGATCTTTCCCGTCATCGCCAGCAGCGATCTCGATGCCATGTTCGGCAGCG
ACGACTGTGTGCTGAAAGATGAGATCGCCGCGTTTTTCAAGAGCGCCGGGCCGGGCGCGTTTTGCTACGCGGCGGTTATA
TCAGATTTTATTCCTTTTCCCGCGCCGGGGGAGAAGCGTCAACCCATCTGGGCCAATACCGTTCGCCGCGCCATGGCGCG
GGTATCGGTAGAGGGAGTCATCATCACTGAAACCATCAGCACTCAGGAGGAGATCCTGGCCGCCCAGGCGCTGCGCACCG
AGCTCAATAACACGCTGGGGCGCTGGCTGTGGTTTGCCCTGCCCGTCGCCGGTATCGATGTCAACAACGAGATTTGGGCG
GAATACATCGAAAAACTGACCGCGCTGCAGCAGGGCATCGTCGCGCCACAGGTACAGCTGGTGCCGACGTTTTTTGGTAA
TGATATCGGCGTACTGGCCGGGCGCCTGTGTAATGCCGCGGTAACCGTAGCCGATAGCCCGGCACGCGTCGCAACAGGGC
CGCTGCAGGGGCTCAAAAACCTGGACAGACCCGTTGATGTAGACGACAACCAGCTCGGTTTGGCCACGCTGCAGGCGCTG
GCCCGCGTGCGCTACAGCGTGCCGATGTGGTATGCCGATTACGAAGGCCTGTACTGGTCAGACGGCGTCACGCTGGAGGC
CGAGGGCGGAGATTATGGCGTGATCGAAAACGTGCGCGTGGCTGACAAAGCCGCCCGGCGCATCCGTATCATGGCGATCC
CCAAAATTGCCGATCGTACCCTGAACAGCACACCGGGCAGTATCGCTGCCCATGAGATGCTGTTTGGCAAGCCGCTGCGT
GAGATGGCCAAGAGCGTGCAGATCAACGGTATCACCTTCCCCGGTGAGGTTCGCCCGCCGAAAGATGGCGATGTGACCAT
CACCTGGCCAGAGAACTCCCGCGTCAGTATCAATTTCATTATCCGCCCCTACAACTGCCCGAAGGAAATCACCGTCGGGA
TTATGTTGGATACCGATCAGGAGAATAACGTATGA

Upstream 100 bases:

>100_bases
GGTGCCAGTGATGACGAATTCGCCACCATTCTGGCGCGCGAACTGCGCGGGATCCAGTTTGGCTGGAATGTGAAAAAACA
GGATATCAAGAGGTAAGCCT

Downstream 100 bases:

>100_bases
CCGCCCGCATCAGTGGTATGTCATTCGACGTCAACGTCGGCGGCATCGAGATCCACATCAACACCGTTTCCCTGGATATC
AGCGACGAGACCAGTGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MVWPSVTITQLNTFGGVTRSIERTVLFVGTASMNYEAIFPVIASSDLDAMFGSDDCVLKDEIAAFFKSAGPGAFCYAAVI
SDFIPFPAPGEKRQPIWANTVRRAMARVSVEGVIITETISTQEEILAAQALRTELNNTLGRWLWFALPVAGIDVNNEIWA
EYIEKLTALQQGIVAPQVQLVPTFFGNDIGVLAGRLCNAAVTVADSPARVATGPLQGLKNLDRPVDVDDNQLGLATLQAL
ARVRYSVPMWYADYEGLYWSDGVTLEAEGGDYGVIENVRVADKAARRIRIMAIPKIADRTLNSTPGSIAAHEMLFGKPLR
EMAKSVQINGITFPGEVRPPKDGDVTITWPENSRVSINFIIRPYNCPKEITVGIMLDTDQENNV

Sequences:

>Translated_384_residues
MVWPSVTITQLNTFGGVTRSIERTVLFVGTASMNYEAIFPVIASSDLDAMFGSDDCVLKDEIAAFFKSAGPGAFCYAAVI
SDFIPFPAPGEKRQPIWANTVRRAMARVSVEGVIITETISTQEEILAAQALRTELNNTLGRWLWFALPVAGIDVNNEIWA
EYIEKLTALQQGIVAPQVQLVPTFFGNDIGVLAGRLCNAAVTVADSPARVATGPLQGLKNLDRPVDVDDNQLGLATLQAL
ARVRYSVPMWYADYEGLYWSDGVTLEAEGGDYGVIENVRVADKAARRIRIMAIPKIADRTLNSTPGSIAAHEMLFGKPLR
EMAKSVQINGITFPGEVRPPKDGDVTITWPENSRVSINFIIRPYNCPKEITVGIMLDTDQENNV
>Mature_384_residues
MVWPSVTITQLNTFGGVTRSIERTVLFVGTASMNYEAIFPVIASSDLDAMFGSDDCVLKDEIAAFFKSAGPGAFCYAAVI
SDFIPFPAPGEKRQPIWANTVRRAMARVSVEGVIITETISTQEEILAAQALRTELNNTLGRWLWFALPVAGIDVNNEIWA
EYIEKLTALQQGIVAPQVQLVPTFFGNDIGVLAGRLCNAAVTVADSPARVATGPLQGLKNLDRPVDVDDNQLGLATLQAL
ARVRYSVPMWYADYEGLYWSDGVTLEAEGGDYGVIENVRVADKAARRIRIMAIPKIADRTLNSTPGSIAAHEMLFGKPLR
EMAKSVQINGITFPGEVRPPKDGDVTITWPENSRVSINFIIRPYNCPKEITVGIMLDTDQENNV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41953; Mature: 41953

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWPSVTITQLNTFGGVTRSIERTVLFVGTASMNYEAIFPVIASSDLDAMFGSDDCVLKD
CCCCCEEEEEEHHHCCHHHCCCEEEEEEEECCCCCEEEEEEEECCCCHHHCCCCCCEEHH
EIAAFFKSAGPGAFCYAAVISDFIPFPAPGEKRQPIWANTVRRAMARVSVEGVIITETIS
HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHEECCEEEEEECC
TQEEILAAQALRTELNNTLGRWLWFALPVAGIDVNNEIWAEYIEKLTALQQGIVAPQVQL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE
VPTFFGNDIGVLAGRLCNAAVTVADSPARVATGPLQGLKNLDRPVDVDDNQLGLATLQAL
EEHHHCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
ARVRYSVPMWYADYEGLYWSDGVTLEAEGGDYGVIENVRVADKAARRIRIMAIPKIADRT
HHHHHCCCEEEECCCCEEECCCEEEEECCCCCCCCCCCHHHHHHHHEEEEEECCCHHHHC
LNSTPGSIAAHEMLFGKPLREMAKSVQINGITFPGEVRPPKDGDVTITWPENSRVSINFI
CCCCCCCHHHHHHHHCCHHHHHHHHEEECEEECCCCCCCCCCCCEEEECCCCCEEEEEEE
IRPYNCPKEITVGIMLDTDQENNV
EECCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MVWPSVTITQLNTFGGVTRSIERTVLFVGTASMNYEAIFPVIASSDLDAMFGSDDCVLKD
CCCCCEEEEEEHHHCCHHHCCCEEEEEEEECCCCCEEEEEEEECCCCHHHCCCCCCEEHH
EIAAFFKSAGPGAFCYAAVISDFIPFPAPGEKRQPIWANTVRRAMARVSVEGVIITETIS
HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHEECCEEEEEECC
TQEEILAAQALRTELNNTLGRWLWFALPVAGIDVNNEIWAEYIEKLTALQQGIVAPQVQL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE
VPTFFGNDIGVLAGRLCNAAVTVADSPARVATGPLQGLKNLDRPVDVDDNQLGLATLQAL
EEHHHCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
ARVRYSVPMWYADYEGLYWSDGVTLEAEGGDYGVIENVRVADKAARRIRIMAIPKIADRT
HHHHHCCCEEEECCCCEEECCCEEEEECCCCCCCCCCCHHHHHHHHEEEEEECCCHHHHC
LNSTPGSIAAHEMLFGKPLREMAKSVQINGITFPGEVRPPKDGDVTITWPENSRVSINFI
CCCCCCCHHHHHHHHCCHHHHHHHHEEECEEECCCCCCCCCCCCEEEECCCCCEEEEEEE
IRPYNCPKEITVGIMLDTDQENNV
EECCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA