| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920155
Identifier: 238920155
GI number: 238920155
Start: 2169217
End: 2169951
Strand: Direct
Name: 238920155
Synonym: NT01EI_2261
Alternate gene names: NA
Gene position: 2169217-2169951 (Clockwise)
Preceding gene: 238920154
Following gene: 238920156
Centisome position: 56.9
GC content: 62.45
Gene sequence:
>735_bases ATGATCAGGGGTGAGGTTAACGCTGCGCAGCTCAAGCAGCTGCGCCAGGCGCTTAAACAGGCCGACATGTCGCCCGCCAA GCGTCAGCGCCTATTGTGGCGTATCGCCAGGCGTGGGCTTATCCCGCTGGCCAAGCGCCATGTTAGAGCACAGACCGCCC CGGATGGTTCGCCCTGGCCCAAGCGTCGGCGCGGCAAACGCAAGATGCTGACCGGACTGCCGAAGTTTTTGGGTGTACGC GAGAACGGCGATGGCTCTGTCACGCTGCGCTTTGGACGCGGGAGCTACGAGAGCAACACGCACGCCGGTGCCATCGGCTA CGTCAACCAGCACGGAGCTGATATCCAGATGTCCGCCGCCGCCCTGCGTCGCAGTGGCACCCAGCAGGCTGGTAAGTCAG CCACCCGAGCGCAGGCGCGCACGCTGGTATCGCTCGGCTATCAGGTCCCGGACACGCCAGACCGTGGGGCCGACGGACGC TACAAGGCACCGACAACACGCGGCAAAAAACGCCGGGTTAGCCAGGCGTGGATCTGCGCGAACCTGAGCATGGCTCAGGC GGGATTGATAATCCGGCAGCTCAAGGGTGAAGCGCCTAAAACGGCGTGGACTATCACCCTGCCGGCACGCGCATTTTTGG GTGCCAGTGATGACGAATTCGCCACCATTCTGGCGCGCGAACTGCGCGGGATCCAGTTTGGCTGGAATGTGAAAAAACAG GATATCAAGAGGTAA
Upstream 100 bases:
>100_bases GATATGCGCGGGGAGATCCCCTACGGCAACCAGCGCTATCGGCTGGACGCGGCAGATATCTGGGTCGCAGAGCACTGCAC CATCCATCCGGGCGCTGACG
Downstream 100 bases:
>100_bases GCCTATGGTTTGGCCCAGTGTCACGATTACCCAGCTGAACACGTTCGGCGGCGTCACCAGGTCCATCGAGCGCACCGTGC TGTTTGTCGGGACTGCCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Like Protein; Phage Protein; Prophage; Virion Morphogenesis Protein
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MIRGEVNAAQLKQLRQALKQADMSPAKRQRLLWRIARRGLIPLAKRHVRAQTAPDGSPWPKRRRGKRKMLTGLPKFLGVR ENGDGSVTLRFGRGSYESNTHAGAIGYVNQHGADIQMSAAALRRSGTQQAGKSATRAQARTLVSLGYQVPDTPDRGADGR YKAPTTRGKKRRVSQAWICANLSMAQAGLIIRQLKGEAPKTAWTITLPARAFLGASDDEFATILARELRGIQFGWNVKKQ DIKR
Sequences:
>Translated_244_residues MIRGEVNAAQLKQLRQALKQADMSPAKRQRLLWRIARRGLIPLAKRHVRAQTAPDGSPWPKRRRGKRKMLTGLPKFLGVR ENGDGSVTLRFGRGSYESNTHAGAIGYVNQHGADIQMSAAALRRSGTQQAGKSATRAQARTLVSLGYQVPDTPDRGADGR YKAPTTRGKKRRVSQAWICANLSMAQAGLIIRQLKGEAPKTAWTITLPARAFLGASDDEFATILARELRGIQFGWNVKKQ DIKR >Mature_244_residues MIRGEVNAAQLKQLRQALKQADMSPAKRQRLLWRIARRGLIPLAKRHVRAQTAPDGSPWPKRRRGKRKMLTGLPKFLGVR ENGDGSVTLRFGRGSYESNTHAGAIGYVNQHGADIQMSAAALRRSGTQQAGKSATRAQARTLVSLGYQVPDTPDRGADGR YKAPTTRGKKRRVSQAWICANLSMAQAGLIIRQLKGEAPKTAWTITLPARAFLGASDDEFATILARELRGIQFGWNVKKQ DIKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26961; Mature: 26961
Theoretical pI: Translated: 12.12; Mature: 12.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRGEVNAAQLKQLRQALKQADMSPAKRQRLLWRIARRGLIPLAKRHVRAQTAPDGSPWP CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCC KRRRGKRKMLTGLPKFLGVRENGDGSVTLRFGRGSYESNTHAGAIGYVNQHGADIQMSAA HHHHHHHHHHHHCHHHHCCEECCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCHHHHH ALRRSGTQQAGKSATRAQARTLVSLGYQVPDTPDRGADGRYKAPTTRGKKRRVSQAWICA HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH NLSMAQAGLIIRQLKGEAPKTAWTITLPARAFLGASDDEFATILARELRGIQFGWNVKKQ CHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHH DIKR HCCC >Mature Secondary Structure MIRGEVNAAQLKQLRQALKQADMSPAKRQRLLWRIARRGLIPLAKRHVRAQTAPDGSPWP CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCC KRRRGKRKMLTGLPKFLGVRENGDGSVTLRFGRGSYESNTHAGAIGYVNQHGADIQMSAA HHHHHHHHHHHHCHHHHCCEECCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCHHHHH ALRRSGTQQAGKSATRAQARTLVSLGYQVPDTPDRGADGRYKAPTTRGKKRRVSQAWICA HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH NLSMAQAGLIIRQLKGEAPKTAWTITLPARAFLGASDDEFATILARELRGIQFGWNVKKQ CHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHH DIKR HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA