| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920151
Identifier: 238920151
GI number: 238920151
Start: 2166410
End: 2167495
Strand: Direct
Name: 238920151
Synonym: NT01EI_2257
Alternate gene names: NA
Gene position: 2166410-2167495 (Clockwise)
Preceding gene: 238920150
Following gene: 238920152
Centisome position: 56.83
GC content: 59.58
Gene sequence:
>1086_bases ATGAGTATGATCACCCCCGAAGCCCAGAAGCTGACGCAGCTGTTCATCGCGAAATTCTCCGATACGTTTAACGACTGCGG GCGCTCTGGCGATATGCAGTTCACCCTGACCGAGCCGCGCGCCATCGCGCTGCGCAAGGCACTGCTGGAAAGTACCGAGT TTTTACGCCTGATCAATTTGATGGATGTACCACACCCGCAGGGGCAGGTCGTCACCGTGGGTGAGTCCACCCTGCGCACC GGCCGTGTCAAGGATGGGCGCTTCACTAAGGGCAGCGGCATCAGCGGCAACGAGTTCAGGCTGGTCGAGACAGACTCCTG CTGCGTCATCACCTGGGCGCAGCTGGCCATCTGGGCAAATGCCGGCACGCCGGGCGAGTTTTTCAACCTGATGAATTCGA CGGCAGTGATCAATTTTGCACTCGATATGCTGCGTATCGGCTTTAACGGTACCCACGCCGCCGAGAACTCTAACCCCACT GACTACCCCAGCGGTGAAGACATCAACATCGGTTGGCATCAGATTGCCAGGAACTGGGGGGACAACGAGGGACGGGTTTC ACGCATTCTCACGACGCCCGTGACCGTGGGAGAAGGGGGCGACTATATCAGTCTGGATGCGATGGCGTCAGACCTGATCC ACGCCTCCATCCCGCCGCAGTACCACAACGACCCACGCCTGGTTGTCCTGGTCGGCGCTGATCTGATCGCCGCAGAAAGC CTACGCCTGTTCAACAAAGAGGATAAACCCTCTGAACAGGTTGCCGCGCGTCAGCTGGGTAAGGACATCGCCGGGCGCCG CGCCATCGTACCGCCGTTTATGCCCGGCAAGCGTATGGTCATTACCATGCTGCCCAATCTGCAGATCCTGACGCTGAAAG GCTCACGCCGCCGCAAGGCCGAGGATGCCGGCGAGCGCAAGCAGTTTGAAAACTCTTACTGGCGCTATGAGGGCTACGCC CTGGGTGATCCCGACCTGTACGCCGCGGTCGATGAGAGCGCAATCACTATCGCCGGTGAGAAGCCAACCAGCGAGGCAGC CCATGATAACTCCAATGCAGCGCCAGAGGGCACAGCAGCAGAATAA
Upstream 100 bases:
>100_bases GCCAGACCTTCGCCGACCTGCAGGGCGATAACACCCCACTGCCGAACGGAAACCCGTCCGGTGACGAATCCATCAATCTG GTCTGAGGCAAATAAACACC
Downstream 100 bases:
>100_bases GCTGCGCGCCGAACGCCTGGGGCATCCCGCAGCCGGGGCCACCGGGGAGAGCCAGCACATCAAGATGCTGGCGCTGGATA ACGACGTGGCGCGACTGCGC
Product: phage major capsid protein, P2 family
Products: NA
Alternate protein names: Capsid Protein; Phage Capsid Protein P2 Family; Phage Capsid Protein; Capsid Proteins; Phage Capsid Protein; Capsid; Phage Gene; Gp2 Phage Capsid Protein P2 Family Protein; Phage-Related Capsid Protein; Prophage; Phage P2 Capsid GpN-Like Protein; Minor Capsid / Capsid Protein N*; Phage Capsid-Like Protein; Prophage Capsid Protein; Phage-Related Capsid Protein; Bacteriophage Protein; Phage-Related Capsid Completion Protein; Phage Protein; Bacteriophage Capsid Protein N; Capsid-Like Protein; Capsid Protein Phage Origin; Phage Capsid Protein N; Phage Capsid Family
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSMITPEAQKLTQLFIAKFSDTFNDCGRSGDMQFTLTEPRAIALRKALLESTEFLRLINLMDVPHPQGQVVTVGESTLRT GRVKDGRFTKGSGISGNEFRLVETDSCCVITWAQLAIWANAGTPGEFFNLMNSTAVINFALDMLRIGFNGTHAAENSNPT DYPSGEDINIGWHQIARNWGDNEGRVSRILTTPVTVGEGGDYISLDAMASDLIHASIPPQYHNDPRLVVLVGADLIAAES LRLFNKEDKPSEQVAARQLGKDIAGRRAIVPPFMPGKRMVITMLPNLQILTLKGSRRRKAEDAGERKQFENSYWRYEGYA LGDPDLYAAVDESAITIAGEKPTSEAAHDNSNAAPEGTAAE
Sequences:
>Translated_361_residues MSMITPEAQKLTQLFIAKFSDTFNDCGRSGDMQFTLTEPRAIALRKALLESTEFLRLINLMDVPHPQGQVVTVGESTLRT GRVKDGRFTKGSGISGNEFRLVETDSCCVITWAQLAIWANAGTPGEFFNLMNSTAVINFALDMLRIGFNGTHAAENSNPT DYPSGEDINIGWHQIARNWGDNEGRVSRILTTPVTVGEGGDYISLDAMASDLIHASIPPQYHNDPRLVVLVGADLIAAES LRLFNKEDKPSEQVAARQLGKDIAGRRAIVPPFMPGKRMVITMLPNLQILTLKGSRRRKAEDAGERKQFENSYWRYEGYA LGDPDLYAAVDESAITIAGEKPTSEAAHDNSNAAPEGTAAE >Mature_360_residues SMITPEAQKLTQLFIAKFSDTFNDCGRSGDMQFTLTEPRAIALRKALLESTEFLRLINLMDVPHPQGQVVTVGESTLRTG RVKDGRFTKGSGISGNEFRLVETDSCCVITWAQLAIWANAGTPGEFFNLMNSTAVINFALDMLRIGFNGTHAAENSNPTD YPSGEDINIGWHQIARNWGDNEGRVSRILTTPVTVGEGGDYISLDAMASDLIHASIPPQYHNDPRLVVLVGADLIAAESL RLFNKEDKPSEQVAARQLGKDIAGRRAIVPPFMPGKRMVITMLPNLQILTLKGSRRRKAEDAGERKQFENSYWRYEGYAL GDPDLYAAVDESAITIAGEKPTSEAAHDNSNAAPEGTAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39502; Mature: 39371
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMITPEAQKLTQLFIAKFSDTFNDCGRSGDMQFTLTEPRAIALRKALLESTEFLRLINL CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH MDVPHPQGQVVTVGESTLRTGRVKDGRFTKGSGISGNEFRLVETDSCCVITWAQLAIWAN HCCCCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEEEEEC AGTPGEFFNLMNSTAVINFALDMLRIGFNGTHAAENSNPTDYPSGEDINIGWHQIARNWG CCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC DNEGRVSRILTTPVTVGEGGDYISLDAMASDLIHASIPPQYHNDPRLVVLVGADLIAAES CCCCCEEEEEECCEEECCCCCEEEHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHH LRLFNKEDKPSEQVAARQLGKDIAGRRAIVPPFMPGKRMVITMLPNLQILTLKGSRRRKA HHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCH EDAGERKQFENSYWRYEGYALGDPDLYAAVDESAITIAGEKPTSEAAHDNSNAAPEGTAA HHHHHHHHHHCCCEEECCEECCCCCEEEEECCCEEEEECCCCCCHHCCCCCCCCCCCCCC E C >Mature Secondary Structure SMITPEAQKLTQLFIAKFSDTFNDCGRSGDMQFTLTEPRAIALRKALLESTEFLRLINL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH MDVPHPQGQVVTVGESTLRTGRVKDGRFTKGSGISGNEFRLVETDSCCVITWAQLAIWAN HCCCCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEEEEEC AGTPGEFFNLMNSTAVINFALDMLRIGFNGTHAAENSNPTDYPSGEDINIGWHQIARNWG CCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC DNEGRVSRILTTPVTVGEGGDYISLDAMASDLIHASIPPQYHNDPRLVVLVGADLIAAES CCCCCEEEEEECCEEECCCCCEEEHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHH LRLFNKEDKPSEQVAARQLGKDIAGRRAIVPPFMPGKRMVITMLPNLQILTLKGSRRRKA HHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCH EDAGERKQFENSYWRYEGYALGDPDLYAAVDESAITIAGEKPTSEAAHDNSNAAPEGTAA HHHHHHHHHHCCCEEECCEECCCCCEEEEECCCEEEEECCCCCCHHCCCCCCCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA