| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238920141
Identifier: 238920141
GI number: 238920141
Start: 2156317
End: 2156550
Strand: Direct
Name: 238920141
Synonym: NT01EI_2247
Alternate gene names: NA
Gene position: 2156317-2156550 (Clockwise)
Preceding gene: 238920140
Following gene: 238920142
Centisome position: 56.56
GC content: 58.12
Gene sequence:
>234_bases ATGGCAGCCAAACACCGTAATACCCCGCATTCCCGTCAGCTCTCATCTGACGCCCCCAGCATTACCTCACGGCTTCACCG TATCCACACCCTGGCGCTCTATCTGCAGGTCGAGCTGTCTCACCGTAAGGACACCCTGCCGTTTATGTGTGTCCCTGCGG TACTCAGCTATATCGCAGACGATATCACCGCCATCCAGCGCGATATCGCCGCCAGCCCGGAACAGCCCATGTAA
Upstream 100 bases:
>100_bases CTCTTGTAACCGGTAGTTCCAACCCTGTACGTCTCACCACCCCGAGATTGGAACCTCTGGCTGGTGAGTTATCACAACTT ACAAGAGAGGATGCCCGATC
Downstream 100 bases:
>100_bases CGCATCAACCCGCGGTGCCCCGTTGGCGCCCGCGGGTTTTATCGTTTATCCGCACCGACGGAGGGCGCCCCATGCCTAAA AATCACGTTGTTGCACCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MAAKHRNTPHSRQLSSDAPSITSRLHRIHTLALYLQVELSHRKDTLPFMCVPAVLSYIADDITAIQRDIAASPEQPM
Sequences:
>Translated_77_residues MAAKHRNTPHSRQLSSDAPSITSRLHRIHTLALYLQVELSHRKDTLPFMCVPAVLSYIADDITAIQRDIAASPEQPM >Mature_76_residues AAKHRNTPHSRQLSSDAPSITSRLHRIHTLALYLQVELSHRKDTLPFMCVPAVLSYIADDITAIQRDIAASPEQPM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8634; Mature: 8503
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKHRNTPHSRQLSSDAPSITSRLHRIHTLALYLQVELSHRKDTLPFMCVPAVLSYIAD CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH DITAIQRDIAASPEQPM HHHHHHHHHHCCCCCCC >Mature Secondary Structure AAKHRNTPHSRQLSSDAPSITSRLHRIHTLALYLQVELSHRKDTLPFMCVPAVLSYIAD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH DITAIQRDIAASPEQPM HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA