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The map label for this gene is cyoC [H]

Identifier: 238920119

GI number: 238920119

Start: 2138498

End: 2139115

Strand: Reverse

Name: cyoC [H]

Synonym: NT01EI_2225

Alternate gene names: 238920119

Gene position: 2139115-2138498 (Counterclockwise)

Preceding gene: 238920120

Following gene: 238920118

Centisome position: 56.11

GC content: 52.59

Gene sequence:

>618_bases
ATGTCAACTGAAACTCTGACCCATCAGAATACAGCCCATGCAGAGCATGGACACCATGACGCAGGAGAGACCAAGGTCTT
CGGATTCTGGATCTACCTGATGAGCGACTGCATTTTGTTTGCGGGCTTGTTCGCGACTTATGCAGTACTGGTAAACGGGA
CTGCAGGCGGCCCCACCGGAAAAGAGATCTTCGATCTGAAGTTCGTCCTGGTCGAAACCTTCCTACTGTTGTTCAGCTCG
ATCACCTATGGTATGGCGATAGGCGCGATGAATAAGGGGAGCGTCGGCGGTGTTAACGTCTGGCTGTTGCTGACTTTCCT
GTTTGGTTTGGGCTTCGTGTCGATGGAGGTCTATGAATTCCATCATCTGATTACAGAAGGTTTTGGGCCGGATCGCAGTG
GGTTCCTCTCCAGCTTTTTCGCGCTGGTCGGCACCCATGGTCTGCACGTAACGGCCGGACTGACTTGGATCGTCGTCATG
ATGATCCAGATCAGCAAGTTCGGCCTGACCGCCGCCAATAAAACCCGTCTGATGTGTCTGAGCCTGTTCTGGCACTTCCT
GGATGTGATCTGGATCTGCCTATTTACAGCCGTCTACCTACTGGGGGTTATGTCATGA

Upstream 100 bases:

>100_bases
AAGAGCTTCGATCACGATGTTGACTACTTTGTGCCGGTTGATGAGATCGCGCGCATCGAGAACCAACACCACGAACAAAT
CCGTAACGCAGGCGTGAAAC

Downstream 100 bases:

>100_bases
GCCATTCATCCCATGAAACCTCTCACGGTGGCGCAGGCCATGGCGGAGTGAAGTCATACCTGATCGGCTTTATCTTGTCG
ATCGTTCTGACGGTGATCCC

Product: cytochrome o ubiquinol oxidase, subunit III

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III; Ubiquinol oxidase chain C [H]

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSTETLTHQNTAHAEHGHHDAGETKVFGFWIYLMSDCILFAGLFATYAVLVNGTAGGPTGKEIFDLKFVLVETFLLLFSS
ITYGMAIGAMNKGSVGGVNVWLLLTFLFGLGFVSMEVYEFHHLITEGFGPDRSGFLSSFFALVGTHGLHVTAGLTWIVVM
MIQISKFGLTAANKTRLMCLSLFWHFLDVIWICLFTAVYLLGVMS

Sequences:

>Translated_205_residues
MSTETLTHQNTAHAEHGHHDAGETKVFGFWIYLMSDCILFAGLFATYAVLVNGTAGGPTGKEIFDLKFVLVETFLLLFSS
ITYGMAIGAMNKGSVGGVNVWLLLTFLFGLGFVSMEVYEFHHLITEGFGPDRSGFLSSFFALVGTHGLHVTAGLTWIVVM
MIQISKFGLTAANKTRLMCLSLFWHFLDVIWICLFTAVYLLGVMS
>Mature_204_residues
STETLTHQNTAHAEHGHHDAGETKVFGFWIYLMSDCILFAGLFATYAVLVNGTAGGPTGKEIFDLKFVLVETFLLLFSSI
TYGMAIGAMNKGSVGGVNVWLLLTFLFGLGFVSMEVYEFHHLITEGFGPDRSGFLSSFFALVGTHGLHVTAGLTWIVVMM
IQISKFGLTAANKTRLMCLSLFWHFLDVIWICLFTAVYLLGVMS

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=205, Percent_Identity=75.609756097561, Blast_Score=313, Evalue=4e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 22552; Mature: 22421

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTETLTHQNTAHAEHGHHDAGETKVFGFWIYLMSDCILFAGLFATYAVLVNGTAGGPTG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KEIFDLKFVLVETFLLLFSSITYGMAIGAMNKGSVGGVNVWLLLTFLFGLGFVSMEVYEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HHLITEGFGPDRSGFLSSFFALVGTHGLHVTAGLTWIVVMMIQISKFGLTAANKTRLMCL
HHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
SLFWHFLDVIWICLFTAVYLLGVMS
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STETLTHQNTAHAEHGHHDAGETKVFGFWIYLMSDCILFAGLFATYAVLVNGTAGGPTG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KEIFDLKFVLVETFLLLFSSITYGMAIGAMNKGSVGGVNVWLLLTFLFGLGFVSMEVYEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HHLITEGFGPDRSGFLSSFFALVGTHGLHVTAGLTWIVVMMIQISKFGLTAANKTRLMCL
HHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
SLFWHFLDVIWICLFTAVYLLGVMS
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]