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The map label for this gene is atoE [H]

Identifier: 238920102

GI number: 238920102

Start: 2127542

End: 2128864

Strand: Direct

Name: atoE [H]

Synonym: NT01EI_2208

Alternate gene names: 238920102

Gene position: 2127542-2128864 (Clockwise)

Preceding gene: 238920101

Following gene: 238920103

Centisome position: 55.81

GC content: 62.06

Gene sequence:

>1323_bases
ATGATTGGCCGCATCTCACGTTTTATGGCCCGCTTCGTTAGCCGCTGGCTGCCCGATCCGCTGATTTTCGCCATGCTGCT
GACCCTGCTGACCTTCGCTATCGCGCTGTGGCTGACACCCCAAACACCGCTGGCCATGGTGCGCTTCTGGGGCGATGGCT
TCTGGAACCTGCTGGCATTCGGCATGCAGATGGCGCTGATCATCGTGACGGGCCATGCGCTGGCGAGCTCCGCCCCGGTG
AAAAGCCTGCTGCGCACCGCCGCATCGGCCGCCAGGACCCCCGCTCAGGGCGTGATGCTGGTGACCTTTTTCGGCTCCGT
CGCCTGCGTCATCAACTGGGGATTTGGGCTGGTGGTGGGGGCGATGTTTGCCCGTGAGGTCGCCCGGCGCGTACCGGGGT
CAGACTACCCGCTGCTGATCGCCTGCGCCTACATCGGCTTTCTGACCTGGGGCGGCGGCTTTTCCGGCTCGATGCCCCTG
CTGGCAGCCACCCCGGGTAACCCGGTGGAGCACGTTGCCGGGTTAATTCCGGTCAGCGATACCCTCTTCACCGGCTTTAA
CATCTTCATCACCCTCGCCCTGATCGTGGTGATGCCCTTTATTACCCGCCTGATGACCCCCAAACCGTCCGATGTCGTCA
GCATCGATCCGGCGCTGCTGATGGAAGAGGCCGATTTCCAGAAAAAATTACCGGCAGATGCCCCCCCGTCAGAGAAGCTG
GAGGAGAGCCGTATTCTGGCGCTGATCATCGGCGCGCTGGGCATCGCCTATCTGGGGATCTACTTCGCCGGGAAGGGGTT
CAACATCACCATCAACACCGTCAACATGATGTTTATGATCGCCGGTCTGCTGCTGCACAAAACGCCGATGGCCTATATGC
GCGCCATCAGCGCCGCCGCGCGCAGCACCGCCGGTATTCTGGTTCAGTTCCCCTTCTATGCCGGGATCCAGCTGATGATG
GAGCACTCCGGCCTCGGTGGCCTGATCACCGAGTTCTTCATCAACGTGGCCAATAAGGACACCTTCCCGCTGATGACCTT
CTTCAGCTCTGCGCTGATCAACTTTGCCGTGCCGTCCGGTGGCGGCCACTGGGTCATTCAGGGGCCATTCGTCCTGCCCG
CTGCGCAAACCCTGGGGGCCGATCTCGGTAAATCGGTGATGGCCATCGCCTACGGCGAGCAGTGGATGAACATGGCGCAG
CCCTTCTGGGCGCTCCCCGCCCTGGCCATCGCCGGGCTTGGGGTCCGCGACATCATGGGCTACTGCATCACCGCCCTGCT
GTTCTCCGGCGTTATTTTTGTTGTCGGTCTGACCCTCTTCTGA

Upstream 100 bases:

>100_bases
TGACCGAACTCGCCGCAGGGTGCGATCTGGCCACCCTGCGCACCAAGACCGAGGCCCATTTTGACGTCGCCGCCGACCTG
TTGATCATGCGGGGTGACGC

Downstream 100 bases:

>100_bases
CGGTATCGACCCACCTTAAGGAAAAGAAGATGAAAAATTGTGTCATCGTCAGCGCAGTGCGCACCGCCATCGGCAGCTTC
AACGGCGCCCTGGCGGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MIGRISRFMARFVSRWLPDPLIFAMLLTLLTFAIALWLTPQTPLAMVRFWGDGFWNLLAFGMQMALIIVTGHALASSAPV
KSLLRTAASAARTPAQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPL
LAATPGNPVEHVAGLIPVSDTLFTGFNIFITLALIVVMPFITRLMTPKPSDVVSIDPALLMEEADFQKKLPADAPPSEKL
EESRILALIIGALGIAYLGIYFAGKGFNITINTVNMMFMIAGLLLHKTPMAYMRAISAAARSTAGILVQFPFYAGIQLMM
EHSGLGGLITEFFINVANKDTFPLMTFFSSALINFAVPSGGGHWVIQGPFVLPAAQTLGADLGKSVMAIAYGEQWMNMAQ
PFWALPALAIAGLGVRDIMGYCITALLFSGVIFVVGLTLF

Sequences:

>Translated_440_residues
MIGRISRFMARFVSRWLPDPLIFAMLLTLLTFAIALWLTPQTPLAMVRFWGDGFWNLLAFGMQMALIIVTGHALASSAPV
KSLLRTAASAARTPAQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPL
LAATPGNPVEHVAGLIPVSDTLFTGFNIFITLALIVVMPFITRLMTPKPSDVVSIDPALLMEEADFQKKLPADAPPSEKL
EESRILALIIGALGIAYLGIYFAGKGFNITINTVNMMFMIAGLLLHKTPMAYMRAISAAARSTAGILVQFPFYAGIQLMM
EHSGLGGLITEFFINVANKDTFPLMTFFSSALINFAVPSGGGHWVIQGPFVLPAAQTLGADLGKSVMAIAYGEQWMNMAQ
PFWALPALAIAGLGVRDIMGYCITALLFSGVIFVVGLTLF
>Mature_440_residues
MIGRISRFMARFVSRWLPDPLIFAMLLTLLTFAIALWLTPQTPLAMVRFWGDGFWNLLAFGMQMALIIVTGHALASSAPV
KSLLRTAASAARTPAQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPL
LAATPGNPVEHVAGLIPVSDTLFTGFNIFITLALIVVMPFITRLMTPKPSDVVSIDPALLMEEADFQKKLPADAPPSEKL
EESRILALIIGALGIAYLGIYFAGKGFNITINTVNMMFMIAGLLLHKTPMAYMRAISAAARSTAGILVQFPFYAGIQLMM
EHSGLGGLITEFFINVANKDTFPLMTFFSSALINFAVPSGGGHWVIQGPFVLPAAQTLGADLGKSVMAIAYGEQWMNMAQ
PFWALPALAIAGLGVRDIMGYCITALLFSGVIFVVGLTLF

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=440, Percent_Identity=93.4090909090909, Blast_Score=834, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 47241; Mature: 47241

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRISRFMARFVSRWLPDPLIFAMLLTLLTFAIALWLTPQTPLAMVRFWGDGFWNLLAF
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHH
GMQMALIIVTGHALASSAPVKSLLRTAASAARTPAQGVMLVTFFGSVACVINWGFGLVVG
HHHHHHHHEECHHHHCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCHHHHHH
AMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPLLAATPGNPVEHVAGLIPVSD
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHCCCCCH
TLFTGFNIFITLALIVVMPFITRLMTPKPSDVVSIDPALLMEEADFQKKLPADAPPSEKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHCCHHHCCCCCCCCHHHH
EESRILALIIGALGIAYLGIYFAGKGFNITINTVNMMFMIAGLLLHKTPMAYMRAISAAA
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFINVANKDTFPLMTFFSSALINFAVPSG
HCCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
GGHWVIQGPFVLPAAQTLGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMG
CCEEEEECCEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHH
YCITALLFSGVIFVVGLTLF
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIGRISRFMARFVSRWLPDPLIFAMLLTLLTFAIALWLTPQTPLAMVRFWGDGFWNLLAF
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHH
GMQMALIIVTGHALASSAPVKSLLRTAASAARTPAQGVMLVTFFGSVACVINWGFGLVVG
HHHHHHHHEECHHHHCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCHHHHHH
AMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPLLAATPGNPVEHVAGLIPVSD
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHCCCCCH
TLFTGFNIFITLALIVVMPFITRLMTPKPSDVVSIDPALLMEEADFQKKLPADAPPSEKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHCCHHHCCCCCCCCHHHH
EESRILALIIGALGIAYLGIYFAGKGFNITINTVNMMFMIAGLLLHKTPMAYMRAISAAA
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFINVANKDTFPLMTFFSSALINFAVPSG
HCCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
GGHWVIQGPFVLPAAQTLGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMG
CCEEEEECCEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHH
YCITALLFSGVIFVVGLTLF
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]