Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919952

Identifier: 238919952

GI number: 238919952

Start: 1978273

End: 1979250

Strand: Reverse

Name: 238919952

Synonym: NT01EI_2056

Alternate gene names: NA

Gene position: 1979250-1978273 (Counterclockwise)

Preceding gene: 238919953

Following gene: 238919951

Centisome position: 51.92

GC content: 45.5

Gene sequence:

>978_bases
ATGGATGTTAAAATAGACAAGCTATTAGGTGATGAACGCCATAGTTTTCTGCTGGAGTTTATTGATACAACTCTGCGTGG
CTGTGGACAGGTGATGTTTCAAAACAATTCATTGACGGGGGCTTTTTTCTTCGGCGGTATTTTTTTTGATGCTTACTTAA
ATAATACTCCGGTGATCGCTTGGGGATGCCTGCTAGGAACGGCTGTGGCGACCTTAACAGGATATCTCATCATACGCGAT
CGCACATCCTTGCGTAGTGGTTTATGTGGATATAACGGCTGTTTGGTCGGTGCCGCGTTACCAGTTTTTTTGGTGCCAAC
ACCAACGTTATGGTGTGTGTTGATCTTGAGCAGTGCGCTTTCAGTCATCGTGGCGACCAGCATATCTGAGTGCTTGAAGG
GCTTGAAGATCGCGGCGTTAACCGGCCCATTTGTTGTGACAACCTGGGTGGTATTACTTGCTAGTTATAACTTTCCTCAG
TTGGTCCACATGGGATTACCGGCGACATTTCTGCCGCAGCAGCATACTCATCTGCTCACTCATTCCTATTATCATACTGA
ATGGTTAGGCGCATTTAATGGTGTTTCGGAGGTTTTTCTATTTAGTAATATCGTCTCTGGGATGCTCATGTGTATCGGGC
TGGCCTGTGGTTCGCTTTGGAATGTTTTCTATGCGGTATTTAGTGCCGTCCTCTCCATGCTGATTGCACTCTGGCTAGGA
GGTACCTTGCAAGGTGTTGATGCGGGTATGTTCTCATTTAGTGCCGTATTAACCGGTATTGCTTTAGGCGCTACCTTTAG
TAAACCTGGCATGATGAGTTTTTGTTATACCGTTATCGGGGTCTTCTTTGTCGTATTAATGCAAGGAGCATTGAATACAG
CATTAGCCCCTTTGGGTATTCCTAGTTTGACGATGCCGTTCGTATTGGCCACATGGGTATTGCTGTTGGTCCATGATAAG
ACTGTCTTACAGGATTAA

Upstream 100 bases:

>100_bases
ACGTCACTGTCTATGGTGGTGTCATCACTGCATGTCGTTTCTGGACTATATAGATATCGTTATCAGTCTATAACTATAAC
TGAATAGGTTGGATGGTCGT

Downstream 100 bases:

>100_bases
CTGATAAGCATGATGAACACACTGCTTAGACAGGCATGGAGAACGCAGAGATATATTAGGAAAGGCTAGCACACAGCAAT
ATATTACGCTCTGGTTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Eukaryotic-Type Low-Affinity Urea Transporter; Urea Transport Protein ApUT; UreA Transporter

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MDVKIDKLLGDERHSFLLEFIDTTLRGCGQVMFQNNSLTGAFFFGGIFFDAYLNNTPVIAWGCLLGTAVATLTGYLIIRD
RTSLRSGLCGYNGCLVGAALPVFLVPTPTLWCVLILSSALSVIVATSISECLKGLKIAALTGPFVVTTWVVLLASYNFPQ
LVHMGLPATFLPQQHTHLLTHSYYHTEWLGAFNGVSEVFLFSNIVSGMLMCIGLACGSLWNVFYAVFSAVLSMLIALWLG
GTLQGVDAGMFSFSAVLTGIALGATFSKPGMMSFCYTVIGVFFVVLMQGALNTALAPLGIPSLTMPFVLATWVLLLVHDK
TVLQD

Sequences:

>Translated_325_residues
MDVKIDKLLGDERHSFLLEFIDTTLRGCGQVMFQNNSLTGAFFFGGIFFDAYLNNTPVIAWGCLLGTAVATLTGYLIIRD
RTSLRSGLCGYNGCLVGAALPVFLVPTPTLWCVLILSSALSVIVATSISECLKGLKIAALTGPFVVTTWVVLLASYNFPQ
LVHMGLPATFLPQQHTHLLTHSYYHTEWLGAFNGVSEVFLFSNIVSGMLMCIGLACGSLWNVFYAVFSAVLSMLIALWLG
GTLQGVDAGMFSFSAVLTGIALGATFSKPGMMSFCYTVIGVFFVVLMQGALNTALAPLGIPSLTMPFVLATWVLLLVHDK
TVLQD
>Mature_325_residues
MDVKIDKLLGDERHSFLLEFIDTTLRGCGQVMFQNNSLTGAFFFGGIFFDAYLNNTPVIAWGCLLGTAVATLTGYLIIRD
RTSLRSGLCGYNGCLVGAALPVFLVPTPTLWCVLILSSALSVIVATSISECLKGLKIAALTGPFVVTTWVVLLASYNFPQ
LVHMGLPATFLPQQHTHLLTHSYYHTEWLGAFNGVSEVFLFSNIVSGMLMCIGLACGSLWNVFYAVFSAVLSMLIALWLG
GTLQGVDAGMFSFSAVLTGIALGATFSKPGMMSFCYTVIGVFFVVLMQGALNTALAPLGIPSLTMPFVLATWVLLLVHDK
TVLQD

Specific function: Unknown

COG id: COG4413

COG function: function code E; Urea transporter

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI157694503, Length=322, Percent_Identity=27.9503105590062, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI289802991, Length=331, Percent_Identity=27.4924471299094, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI226371772, Length=318, Percent_Identity=27.0440251572327, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI226371768, Length=318, Percent_Identity=27.0440251572327, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI225690519, Length=318, Percent_Identity=27.0440251572327, Blast_Score=79, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34983; Mature: 34983

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVKIDKLLGDERHSFLLEFIDTTLRGCGQVMFQNNSLTGAFFFGGIFFDAYLNNTPVIA
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCHHH
WGCLLGTAVATLTGYLIIRDRTSLRSGLCGYNGCLVGAALPVFLVPTPTLWCVLILSSAL
HHHHHHHHHHHHHHHHEEECCHHHHCCCCCCCCHHHHHHCHHEECCCHHHHHHHHHHHHH
SVIVATSISECLKGLKIAALTGPFVVTTWVVLLASYNFPQLVHMGLPATFLPQQHTHLLT
HHHHHHHHHHHHHCCEEHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHH
HSYYHTEWLGAFNGVSEVFLFSNIVSGMLMCIGLACGSLWNVFYAVFSAVLSMLIALWLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTLQGVDAGMFSFSAVLTGIALGATFSKPGMMSFCYTVIGVFFVVLMQGALNTALAPLGI
CCHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PSLTMPFVLATWVLLLVHDKTVLQD
CHHHHHHHHHHHHHHHHHCHHHHCC
>Mature Secondary Structure
MDVKIDKLLGDERHSFLLEFIDTTLRGCGQVMFQNNSLTGAFFFGGIFFDAYLNNTPVIA
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCHHH
WGCLLGTAVATLTGYLIIRDRTSLRSGLCGYNGCLVGAALPVFLVPTPTLWCVLILSSAL
HHHHHHHHHHHHHHHHEEECCHHHHCCCCCCCCHHHHHHCHHEECCCHHHHHHHHHHHHH
SVIVATSISECLKGLKIAALTGPFVVTTWVVLLASYNFPQLVHMGLPATFLPQQHTHLLT
HHHHHHHHHHHHHCCEEHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHH
HSYYHTEWLGAFNGVSEVFLFSNIVSGMLMCIGLACGSLWNVFYAVFSAVLSMLIALWLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTLQGVDAGMFSFSAVLTGIALGATFSKPGMMSFCYTVIGVFFVVLMQGALNTALAPLGI
CCHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PSLTMPFVLATWVLLLVHDKTVLQD
CHHHHHHHHHHHHHHHHHCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA