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The map label for this gene is ybcO [H]

Identifier: 238919922

GI number: 238919922

Start: 1953211

End: 1953513

Strand: Reverse

Name: ybcO [H]

Synonym: NT01EI_2026

Alternate gene names: 238919922

Gene position: 1953513-1953211 (Counterclockwise)

Preceding gene: 238919923

Following gene: 238919921

Centisome position: 51.24

GC content: 60.4

Gene sequence:

>303_bases
GTGATGAAAAAATCAGGGGCGTTTCGCAGCCGGGCGTGGCGGGAGTCGGCCCGGGGGCAGGGGTGTACCCTGCAAATTCC
CGGAATTTGTAACGGTGATCCGCAGACGGTGGTGCTGTGCCATCTAGCCAGCCCGATGCATGGCATGGGGTACAAGTCGG
ATGATTTCTGGGCGGTGTATGGCTGTTCGGCCTGCCACGATGTATTGGATGGCCGGGCACCCTATGACTGGCGACCCGGC
GAGCGGGAGGAGGTGATGCTGGCGGCGCTGTATTGGACGCTGAGGGTAGTGATAGATGATTAA

Upstream 100 bases:

>100_bases
ATCGCGGGGTGGCCGGGGTGATTTGGAATGAGACCCTGAGCCAGCATTTTGCCAGCGAGGCAGAAATGGCGCTGGCGGTG
GATCAGCTGATGGCGTTTTA

Downstream 100 bases:

>100_bases
ACGATAGGCGATATCTTCTTGATGTAGAGAATTATCGTGGTACTGTATATGTATACAGTTTATATATGGCTAAATAACCA
GTATCCCATTTTTAGAGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MMKKSGAFRSRAWRESARGQGCTLQIPGICNGDPQTVVLCHLASPMHGMGYKSDDFWAVYGCSACHDVLDGRAPYDWRPG
EREEVMLAALYWTLRVVIDD

Sequences:

>Translated_100_residues
MMKKSGAFRSRAWRESARGQGCTLQIPGICNGDPQTVVLCHLASPMHGMGYKSDDFWAVYGCSACHDVLDGRAPYDWRPG
EREEVMLAALYWTLRVVIDD
>Mature_100_residues
MMKKSGAFRSRAWRESARGQGCTLQIPGICNGDPQTVVLCHLASPMHGMGYKSDDFWAVYGCSACHDVLDGRAPYDWRPG
EREEVMLAALYWTLRVVIDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786761, Length=64, Percent_Identity=45.3125, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010774 [H]

Pfam domain/function: PF07102 DUF1364 [H]

EC number: NA

Molecular weight: Translated: 11210; Mature: 11210

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKSGAFRSRAWRESARGQGCTLQIPGICNGDPQTVVLCHLASPMHGMGYKSDDFWAVY
CCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEE
GCSACHDVLDGRAPYDWRPGEREEVMLAALYWTLRVVIDD
ECHHHHHHHCCCCCCCCCCCCHHHHHHHHEEEEEEEEECC
>Mature Secondary Structure
MMKKSGAFRSRAWRESARGQGCTLQIPGICNGDPQTVVLCHLASPMHGMGYKSDDFWAVY
CCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEE
GCSACHDVLDGRAPYDWRPGEREEVMLAALYWTLRVVIDD
ECHHHHHHHCCCCCCCCCCCCHHHHHHHHEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8648624; 9278503 [H]