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The map label for this gene is ydfM [H]

Identifier: 238919871

GI number: 238919871

Start: 1902529

End: 1903458

Strand: Direct

Name: ydfM [H]

Synonym: NT01EI_1975

Alternate gene names: 238919871

Gene position: 1902529-1903458 (Clockwise)

Preceding gene: 238919870

Following gene: 238919872

Centisome position: 49.9

GC content: 57.63

Gene sequence:

>930_bases
ATGAATCAACCACAGTACATGCCGTTTTCACGGGGCCCCAGTGCGGATAAGAGCCGTGAGGCGGCCAGTAAACGCAGCAC
CTGGATTAGCGTGTTCGTCAATATCGCTCTAACGGTGTTTCAGATCATCGCCGGCGTTTTTTCCGGCTCTCAGGGGTTGA
TCGCCGACGGTCTCCATTCGTTATCCGACCTGGCGGCGGACTTTGTCGTCCTCTGCGCCGTTCAGCGCAGTCAGCAGGCC
CCGGATGTGTATCATCACTATGGGCATCGGCGCTACGAGAATGCGGCCTCTTTGATTCTGGGTGGACTCCTGCTGGCCGT
CGGTATTGGGATGATCATTTCAGCCATCAATAAGCTCAGCGATCCGGCGGCCATTCCTACCGTGCATTATGCTGCGCTCG
GCGTGGCAGTTGTTGCACTGCTGGCGAAAGAGATACTCTTTCGCTACATGCTCACCGTCGCCAATCGGGTTGGCTCTGGA
ATGCTGGTCGCCAACGCCTGGCATGCCCGCTCAGACGCCGCCTCATCGTTGATTGTCGCCATCGGGATCGCTGGAAATCT
GCTGGGGTTCGGGTTACTCGATCCTATCGCAGCGCTGATCGTCGGGACAATAGTGAGCCGTATGGGGTGGCGATTCAGCG
CGGATGCGCTGCATGATTTAACCGATCGGGCCGCCGATGCGGAGCAGAACGCCGCCATCCGGCAGGCTATTTTATCTACC
CCCGGGGTCATCGGACTGCATGCGCTGAAAACCCGCAAAAGCGGCGATCTGATCCTGGCCGATGTCCATCTGGAAATCGA
TGGTCGGCTTAGCGTCACCGCAGGACATCATATCGCCAGAGAGACGGAGCGAAGGGTTATGGCAGAACATCCGGTGCTGT
CTCTGATGACGCACGTTGACCCTGTCGTTTGTGCAAGTCCTAACGGTTAA

Upstream 100 bases:

>100_bases
AGCATGCTGGAGCATCTGGATGAGCCGCGCCTGGATCTCGACTGAGGACGCGCGGCCTCGCCCCCCCCTTCTATCTTCGC
CAATCCAGGATCTTTATGCC

Downstream 100 bases:

>100_bases
GATGAGATACAACGCCCTCCACTCTTCCCGTTGCAGCGCGCCGCCGCGGGCGCTGCAACCTGATGATACGTGACAACGTC
ACCAAGTGACTCACTTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MNQPQYMPFSRGPSADKSREAASKRSTWISVFVNIALTVFQIIAGVFSGSQGLIADGLHSLSDLAADFVVLCAVQRSQQA
PDVYHHYGHRRYENAASLILGGLLLAVGIGMIISAINKLSDPAAIPTVHYAALGVAVVALLAKEILFRYMLTVANRVGSG
MLVANAWHARSDAASSLIVAIGIAGNLLGFGLLDPIAALIVGTIVSRMGWRFSADALHDLTDRAADAEQNAAIRQAILST
PGVIGLHALKTRKSGDLILADVHLEIDGRLSVTAGHHIARETERRVMAEHPVLSLMTHVDPVVCASPNG

Sequences:

>Translated_309_residues
MNQPQYMPFSRGPSADKSREAASKRSTWISVFVNIALTVFQIIAGVFSGSQGLIADGLHSLSDLAADFVVLCAVQRSQQA
PDVYHHYGHRRYENAASLILGGLLLAVGIGMIISAINKLSDPAAIPTVHYAALGVAVVALLAKEILFRYMLTVANRVGSG
MLVANAWHARSDAASSLIVAIGIAGNLLGFGLLDPIAALIVGTIVSRMGWRFSADALHDLTDRAADAEQNAAIRQAILST
PGVIGLHALKTRKSGDLILADVHLEIDGRLSVTAGHHIARETERRVMAEHPVLSLMTHVDPVVCASPNG
>Mature_309_residues
MNQPQYMPFSRGPSADKSREAASKRSTWISVFVNIALTVFQIIAGVFSGSQGLIADGLHSLSDLAADFVVLCAVQRSQQA
PDVYHHYGHRRYENAASLILGGLLLAVGIGMIISAINKLSDPAAIPTVHYAALGVAVVALLAKEILFRYMLTVANRVGSG
MLVANAWHARSDAASSLIVAIGIAGNLLGFGLLDPIAALIVGTIVSRMGWRFSADALHDLTDRAADAEQNAAIRQAILST
PGVIGLHALKTRKSGDLILADVHLEIDGRLSVTAGHHIARETERRVMAEHPVLSLMTHVDPVVCASPNG

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=273, Percent_Identity=26.7399267399267, Blast_Score=103, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6325032, Length=225, Percent_Identity=28, Blast_Score=95, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6323831, Length=235, Percent_Identity=28.0851063829787, Blast_Score=90, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 32742; Mature: 32742

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPQYMPFSRGPSADKSREAASKRSTWISVFVNIALTVFQIIAGVFSGSQGLIADGLHS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LSDLAADFVVLCAVQRSQQAPDVYHHYGHRRYENAASLILGGLLLAVGIGMIISAINKLS
HHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPAAIPTVHYAALGVAVVALLAKEILFRYMLTVANRVGSGMLVANAWHARSDAASSLIVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH
IGIAGNLLGFGLLDPIAALIVGTIVSRMGWRFSADALHDLTDRAADAEQNAAIRQAILST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
PGVIGLHALKTRKSGDLILADVHLEIDGRLSVTAGHHIARETERRVMAEHPVLSLMTHVD
CCHHHHHHHHCCCCCCEEEEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
PVVCASPNG
CEEEECCCC
>Mature Secondary Structure
MNQPQYMPFSRGPSADKSREAASKRSTWISVFVNIALTVFQIIAGVFSGSQGLIADGLHS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LSDLAADFVVLCAVQRSQQAPDVYHHYGHRRYENAASLILGGLLLAVGIGMIISAINKLS
HHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPAAIPTVHYAALGVAVVALLAKEILFRYMLTVANRVGSGMLVANAWHARSDAASSLIVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH
IGIAGNLLGFGLLDPIAALIVGTIVSRMGWRFSADALHDLTDRAADAEQNAAIRQAILST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
PGVIGLHALKTRKSGDLILADVHLEIDGRLSVTAGHHIARETERRVMAEHPVLSLMTHVD
CCHHHHHHHHCCCCCCEEEEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
PVVCASPNG
CEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]