Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919853

Identifier: 238919853

GI number: 238919853

Start: 1884339

End: 1884626

Strand: Direct

Name: 238919853

Synonym: NT01EI_1957

Alternate gene names: NA

Gene position: 1884339-1884626 (Clockwise)

Preceding gene: 238919852

Following gene: 238919856

Centisome position: 49.43

GC content: 56.6

Gene sequence:

>288_bases
GTGATGCCGCTGTTTGGTATGGTGACCCGCGATACGGCGCAGAGTAAACGCTGCACCCAGAGCGCACGGATCCGTCAGCT
GGCGCTACAGGTGCTCTCGACTCAGGTCAGTGATGAAACCAATATCCTGCGCCTGATTGAGCTGGTAAATCATCAGGGGC
TACCGGAGATCGAAATCCAACTGCCCTATGCGCTGGAGGAGTCCCAACTGAGCACGATCCGCACCCAGTCAGTCATTCCT
GTCCACATTGAACTGTGCGGCGAGCGGTTGCTGATTGCGTTGACGTAA

Upstream 100 bases:

>100_bases
TCGGTCTGTCGGAAAACCAGAGCGAGTTTGTTTCGACTACACGCATTTTCTGTCCGCATCGTGTAATAAGCGCTGGCGTT
TCGTTGATGCCATTTGTGGG

Downstream 100 bases:

>100_bases
CGATGGGAAGCCAGGTGAAAAGAGCGCTCTAAGCCCAGTCAGGCAATGCATCGTGGTTTGCTCAGACAAAAAAACACGGA
TCCGTACTCTCTCAGGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MMPLFGMVTRDTAQSKRCTQSARIRQLALQVLSTQVSDETNILRLIELVNHQGLPEIEIQLPYALEESQLSTIRTQSVIP
VHIELCGERLLIALT

Sequences:

>Translated_95_residues
MMPLFGMVTRDTAQSKRCTQSARIRQLALQVLSTQVSDETNILRLIELVNHQGLPEIEIQLPYALEESQLSTIRTQSVIP
VHIELCGERLLIALT
>Mature_95_residues
MMPLFGMVTRDTAQSKRCTQSARIRQLALQVLSTQVSDETNILRLIELVNHQGLPEIEIQLPYALEESQLSTIRTQSVIP
VHIELCGERLLIALT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10713; Mature: 10713

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPLFGMVTRDTAQSKRCTQSARIRQLALQVLSTQVSDETNILRLIELVNHQGLPEIEIQ
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEE
LPYALEESQLSTIRTQSVIPVHIELCGERLLIALT
CCCCCCCHHHHHHHCCCCCEEEEEECCCEEEEEEC
>Mature Secondary Structure
MMPLFGMVTRDTAQSKRCTQSARIRQLALQVLSTQVSDETNILRLIELVNHQGLPEIEIQ
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEE
LPYALEESQLSTIRTQSVIPVHIELCGERLLIALT
CCCCCCCHHHHHHHCCCCCEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA