| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is hslJ [H]
Identifier: 238919831
GI number: 238919831
Start: 1863386
End: 1863805
Strand: Reverse
Name: hslJ [H]
Synonym: NT01EI_1935
Alternate gene names: 238919831
Gene position: 1863805-1863386 (Counterclockwise)
Preceding gene: 238919834
Following gene: 238919829
Centisome position: 48.89
GC content: 65.24
Gene sequence:
>420_bases ATGAAAAGGATCCTGACCGTCCTGCTGTGTAGCCTGGCCGGTGCCTGCAGCGCCCCGCCGACGGCACAACAGCTGCTGCA CCATCGCTATGTTCTGCAGGCTATCGATGACCATCCCCTCGTGGAAACGACGGCGACCCGCGCGCTGACGCCGGATCTGG AGTTTGGCGAGAAGCTGTGGGTCAGCGCCAGTCTGTGCGGTCAGCTGAGTGGCCAGGCCACCCTGCGGCGGGGCACGCTG CGCATCGCTGAGCTGCAGCGCACACCGGCTCCCTGTCCCGATCCTGTCTGGCAAACGGCGCAGCATCGTCTGGAGACGAT GCTGCGGTACGGCGCCCGGCTCACGCTGCAGGGAGATACGCTGGAGCTGCGCGATGCGCAGGGATTGCTGTTACGCTATA GGCTACGCGACTGGATGTAG
Upstream 100 bases:
>100_bases AGTATAGATGAGACAGCGAAAACTGCCGTGAAAAGCAAGGCATCATTGCATTTATTCCACGCCATACACACAGGCAGTCC CTCTGGAGAGAGAAACCGAC
Downstream 100 bases:
>100_bases CGTCTGCCGTACGATCAGTTGGGACAGCGGCCGCCGATCACACCCCGCTCTGTGCAGCGCTTACCGTCCGGCAGCTGGCA CTGTACCAGCGACGTCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKRILTVLLCSLAGACSAPPTAQQLLHHRYVLQAIDDHPLVETTATRALTPDLEFGEKLWVSASLCGQLSGQATLRRGTL RIAELQRTPAPCPDPVWQTAQHRLETMLRYGARLTLQGDTLELRDAQGLLLRYRLRDWM
Sequences:
>Translated_139_residues MKRILTVLLCSLAGACSAPPTAQQLLHHRYVLQAIDDHPLVETTATRALTPDLEFGEKLWVSASLCGQLSGQATLRRGTL RIAELQRTPAPCPDPVWQTAQHRLETMLRYGARLTLQGDTLELRDAQGLLLRYRLRDWM >Mature_139_residues MKRILTVLLCSLAGACSAPPTAQQLLHHRYVLQAIDDHPLVETTATRALTPDLEFGEKLWVSASLCGQLSGQATLRRGTL RIAELQRTPAPCPDPVWQTAQHRLETMLRYGARLTLQGDTLELRDAQGLLLRYRLRDWM
Specific function: Unknown
COG id: COG3187
COG function: function code O; Heat shock protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787644, Length=144, Percent_Identity=31.9444444444444, Blast_Score=77, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005184 [H]
Pfam domain/function: PF03724 META [H]
EC number: NA
Molecular weight: Translated: 15628; Mature: 15628
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILTVLLCSLAGACSAPPTAQQLLHHRYVLQAIDDHPLVETTATRALTPDLEFGEKLW CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHH VSASLCGQLSGQATLRRGTLRIAELQRTPAPCPDPVWQTAQHRLETMLRYGARLTLQGDT HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCC LELRDAQGLLLRYRLRDWM EEECCCCHHHHHHHHHHCC >Mature Secondary Structure MKRILTVLLCSLAGACSAPPTAQQLLHHRYVLQAIDDHPLVETTATRALTPDLEFGEKLW CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHH VSASLCGQLSGQATLRRGTLRIAELQRTPAPCPDPVWQTAQHRLETMLRYGARLTLQGDT HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCC LELRDAQGLLLRYRLRDWM EEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9025293; 9097039; 9278503; 8349564 [H]