| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is aroH [H]
Identifier: 238919810
GI number: 238919810
Start: 1842670
End: 1843716
Strand: Reverse
Name: aroH [H]
Synonym: NT01EI_1914
Alternate gene names: 238919810
Gene position: 1843716-1842670 (Counterclockwise)
Preceding gene: 238919811
Following gene: 238919809
Centisome position: 48.36
GC content: 59.31
Gene sequence:
>1047_bases ATGCACAAAACCGATGAACTGCGTACTGCGCGCATCGATACATTGATTTCGCCCGCAGAACTGGCGCAGCAACTGCCTAT CGATCCGTTGGTGGCAGATCACGTGACAACGTCACGAAAACGAATTGAACGCATCCTTCAGGGCGATGATCCCCGCCTGT TAGTCATCATTGGCCCCTGCTCCATCCACGATACGGCGGCGGCGCTGGATTACGCTCAGCGTCTGGCTCCCCTGTGCCAA CGTTATCAGGATCGTCTGGAGATCGTGATGCGCACCTATTTTGAAAAACCGCGCACCGTTATCGGCTGGAAAGGGCTGAT CTCCGATCCGGATCTGAACGGCGCCTGCCGCGTCAACCACGGCATCCGTCTGGCCCGTGAGCTGCTACTGCGGGTCAACC AGCTGGGGGTGCCTACCGCAACAGAATTTTTAGATATGGTGACCGGGCAATATATTGCCGACCTGATCAGCTGGGGCGCG ATTGGCGCACGTACCACGGAGAGCCAAATCCACCGCGAGATGGCCTCGGCGCTCTCCTGTCCGGTTGGATTTAAAAACGG CACCGACGGCAGTACCCGCATCGCTATCGACGCGATCCGCGCTGCCCGCGCCAGCCATATGTTCCTGTCGCCGGATAAAG ATGGCCGGATGACCATCTACCAGACCAGCGGTAACCCGTTTGGCCATATCATCATGCGCGGCGGTAAGGTGCCCAACTAC CATGCTGCCGACATTGAGCAAACCTGTCAGCAGCTGCGCCAGTTCGATCTGCCACCTTACCTGATCGTCGACACCAGCCA TGGCAATTGCCAAAAGCAGCATCGTAGGCAGCTGGCTGTCGCCGACGCGGTCGCCAGCCAGATCCGCGCAGGTTCCCGCA ATATCGTCGGGATTATGGCGGAGAGCTTCATCGCCGCAGGAGCCCAGAAAAATCAGCCTGGCCAGGCGCTGATTTACGGG CAATCGATCACTGACCCCTGTCTGGGCTGGGAGGACAGCGAGCAGCTGCTGGCGCAGCTGGCCGATGCAGCTGACAGCCG CCTCTGA
Upstream 100 bases:
>100_bases AGCCACGGCACTCTATTGATTTGTCCTGTAATTGCTTTATCGTGATCGCCATCACTTCCCGGTACTCTTGCCGTTGAGAA GACCAGCTTTAGAGACAACC
Downstream 100 bases:
>100_bases TCCCCGTCAGGACGCACGTCCAGTGCGTCCTGACATCCCCATTCTCCTATTACTTTATCTTTTTGTGCCCTTCTGCTTGA TCCAGATCATAAACAATTCG
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MHKTDELRTARIDTLISPAELAQQLPIDPLVADHVTTSRKRIERILQGDDPRLLVIIGPCSIHDTAAALDYAQRLAPLCQ RYQDRLEIVMRTYFEKPRTVIGWKGLISDPDLNGACRVNHGIRLARELLLRVNQLGVPTATEFLDMVTGQYIADLISWGA IGARTTESQIHREMASALSCPVGFKNGTDGSTRIAIDAIRAARASHMFLSPDKDGRMTIYQTSGNPFGHIIMRGGKVPNY HAADIEQTCQQLRQFDLPPYLIVDTSHGNCQKQHRRQLAVADAVASQIRAGSRNIVGIMAESFIAAGAQKNQPGQALIYG QSITDPCLGWEDSEQLLAQLADAADSRL
Sequences:
>Translated_348_residues MHKTDELRTARIDTLISPAELAQQLPIDPLVADHVTTSRKRIERILQGDDPRLLVIIGPCSIHDTAAALDYAQRLAPLCQ RYQDRLEIVMRTYFEKPRTVIGWKGLISDPDLNGACRVNHGIRLARELLLRVNQLGVPTATEFLDMVTGQYIADLISWGA IGARTTESQIHREMASALSCPVGFKNGTDGSTRIAIDAIRAARASHMFLSPDKDGRMTIYQTSGNPFGHIIMRGGKVPNY HAADIEQTCQQLRQFDLPPYLIVDTSHGNCQKQHRRQLAVADAVASQIRAGSRNIVGIMAESFIAAGAQKNQPGQALIYG QSITDPCLGWEDSEQLLAQLADAADSRL >Mature_348_residues MHKTDELRTARIDTLISPAELAQQLPIDPLVADHVTTSRKRIERILQGDDPRLLVIIGPCSIHDTAAALDYAQRLAPLCQ RYQDRLEIVMRTYFEKPRTVIGWKGLISDPDLNGACRVNHGIRLARELLLRVNQLGVPTATEFLDMVTGQYIADLISWGA IGARTTESQIHREMASALSCPVGFKNGTDGSTRIAIDAIRAARASHMFLSPDKDGRMTIYQTSGNPFGHIIMRGGKVPNY HAADIEQTCQQLRQFDLPPYLIVDTSHGNCQKQHRRQLAVADAVASQIRAGSRNIVGIMAESFIAAGAQKNQPGQALIYG QSITDPCLGWEDSEQLLAQLADAADSRL
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787996, Length=348, Percent_Identity=75, Blast_Score=554, Evalue=1e-159, Organism=Escherichia coli, GI1786969, Length=346, Percent_Identity=53.1791907514451, Blast_Score=387, Evalue=1e-109, Organism=Escherichia coli, GI1788953, Length=341, Percent_Identity=50.4398826979472, Blast_Score=348, Evalue=4e-97, Organism=Saccharomyces cerevisiae, GI6319726, Length=346, Percent_Identity=46.8208092485549, Blast_Score=302, Evalue=5e-83, Organism=Saccharomyces cerevisiae, GI6320240, Length=353, Percent_Identity=42.7762039660057, Blast_Score=297, Evalue=2e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 38311; Mature: 38311
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKTDELRTARIDTLISPAELAQQLPIDPLVADHVTTSRKRIERILQGDDPRLLVIIGPC CCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC SIHDTAAALDYAQRLAPLCQRYQDRLEIVMRTYFEKPRTVIGWKGLISDPDLNGACRVNH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECH GIRLARELLLRVNQLGVPTATEFLDMVTGQYIADLISWGAIGARTTESQIHREMASALSC HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC PVGFKNGTDGSTRIAIDAIRAARASHMFLSPDKDGRMTIYQTSGNPFGHIIMRGGKVPNY CCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCC HAADIEQTCQQLRQFDLPPYLIVDTSHGNCQKQHRRQLAVADAVASQIRAGSRNIVGIMA CHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ESFIAAGAQKNQPGQALIYGQSITDPCLGWEDSEQLLAQLADAADSRL HHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MHKTDELRTARIDTLISPAELAQQLPIDPLVADHVTTSRKRIERILQGDDPRLLVIIGPC CCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC SIHDTAAALDYAQRLAPLCQRYQDRLEIVMRTYFEKPRTVIGWKGLISDPDLNGACRVNH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECH GIRLARELLLRVNQLGVPTATEFLDMVTGQYIADLISWGAIGARTTESQIHREMASALSC HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC PVGFKNGTDGSTRIAIDAIRAARASHMFLSPDKDGRMTIYQTSGNPFGHIIMRGGKVPNY CCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCC HAADIEQTCQQLRQFDLPPYLIVDTSHGNCQKQHRRQLAVADAVASQIRAGSRNIVGIMA CHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ESFIAAGAQKNQPGQALIYGQSITDPCLGWEDSEQLLAQLADAADSRL HHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]