| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919776
Identifier: 238919776
GI number: 238919776
Start: 1812727
End: 1812858
Strand: Direct
Name: 238919776
Synonym: NT01EI_1881
Alternate gene names: NA
Gene position: 1812727-1812858 (Clockwise)
Preceding gene: 238919774
Following gene: 238919781
Centisome position: 47.55
GC content: 53.79
Gene sequence:
>132_bases ATGCTATCTTTATCGCCGCATGATGATAATGTTTATGGCCATCAGGCACTCGATGAGAGTGACGGCAGCGGGTTATCGCA CCTGCTGCGTCATTTGGGCGCGGGATTGGCCCACTTGTGCTGGGGTTACTGA
Upstream 100 bases:
>100_bases AGGGTTATCAGTATTTGTTCGATAGGAGTAGGCTATCGTTTATGGATGGTGGCACATTTTATTTTTATTCTCTTGGCGTG CTGCTCTGGACTTTACGCCG
Downstream 100 bases:
>100_bases TCTAGGGGGGAGCTGATGGCCTTAAACAGCGGGCATTCGGCGATACCGATGACACCGTTACTATCGTGGATCTGCGTCTG CGTTACCAGTGAGCGGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 43; Mature: 43
Protein sequence:
>43_residues MLSLSPHDDNVYGHQALDESDGSGLSHLLRHLGAGLAHLCWGY
Sequences:
>Translated_43_residues MLSLSPHDDNVYGHQALDESDGSGLSHLLRHLGAGLAHLCWGY >Mature_43_residues MLSLSPHDDNVYGHQALDESDGSGLSHLLRHLGAGLAHLCWGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4644; Mature: 4644
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLSPHDDNVYGHQALDESDGSGLSHLLRHLGAGLAHLCWGY CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCC >Mature Secondary Structure MLSLSPHDDNVYGHQALDESDGSGLSHLLRHLGAGLAHLCWGY CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA