Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919765

Identifier: 238919765

GI number: 238919765

Start: 1802328

End: 1802525

Strand: Direct

Name: 238919765

Synonym: NT01EI_1869

Alternate gene names: NA

Gene position: 1802328-1802525 (Clockwise)

Preceding gene: 238919764

Following gene: 238919766

Centisome position: 47.28

GC content: 48.48

Gene sequence:

>198_bases
ATGCTTTCCTTTTTTACCAACATCCCTCCATGTTTGAGCAGCATGGAAGCCTGTGCTTCTGCTCACTTCTGGGTCGGTAA
GCTTATGTCGATGGGCCATAACATCAAACTGATGGCCCCTCAGTTCGTCAAGCCCTATGTCAAAACCAATAAGCATGATG
CTGCAGACGCAGAGGCTATTTGCGAAGCCGTTACGTGA

Upstream 100 bases:

>100_bases
TAAAACTATCGGTATCGATTTGGCAAAAGAGGTTTTCCAGGTTCATTGAATTGACGAACACGGCCAGCGATTGCCCAACA
GGCAGCTCAAACGCACAAAA

Downstream 100 bases:

>100_bases
CCCAACATGCGATGCATGCCTGTCAAGCTCCCTGAGCGACAAACCGTACTGGCACTTCACCGAAGTCGTCAGCGTTTCAT
CAAGCAATAGAGTGCTCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MLSFFTNIPPCLSSMEACASAHFWVGKLMSMGHNIKLMAPQFVKPYVKTNKHDAADAEAICEAVT

Sequences:

>Translated_65_residues
MLSFFTNIPPCLSSMEACASAHFWVGKLMSMGHNIKLMAPQFVKPYVKTNKHDAADAEAICEAVT
>Mature_65_residues
MLSFFTNIPPCLSSMEACASAHFWVGKLMSMGHNIKLMAPQFVKPYVKTNKHDAADAEAICEAVT

Specific function: Required for the transposition of an insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 7131; Mature: 7131

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
12.3 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
7.7 %Met     (Mature Protein)
12.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSFFTNIPPCLSSMEACASAHFWVGKLMSMGHNIKLMAPQFVKPYVKTNKHDAADAEAI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCHHHH
CEAVT
HHHCC
>Mature Secondary Structure
MLSFFTNIPPCLSSMEACASAHFWVGKLMSMGHNIKLMAPQFVKPYVKTNKHDAADAEAI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCHHHH
CEAVT
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]