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The map label for this gene is ycjF [C]

Identifier: 238919733

GI number: 238919733

Start: 1774088

End: 1775155

Strand: Direct

Name: ycjF [C]

Synonym: NT01EI_1837

Alternate gene names: 238919733

Gene position: 1774088-1775155 (Clockwise)

Preceding gene: 238919732

Following gene: 238919735

Centisome position: 46.54

GC content: 70.04

Gene sequence:

>1068_bases
GTGAACGATCCGATTAAACCGCGCATCGATTTCGATGCGTCGCTGAGCGCAGAGCCGACGCCGTCGCTGCAGCCGGGCAT
GGCATTCGACGCGCATCAGGCCGAGGCGTTTACGCCCCTGGCGCCGTCAGAGACCGAGGCGGAGCAGGAGGAGGGGCAGC
TGGAAGGGATGGTCAGCATGGCCCTGCGTCCGCGCCGCAGCCTGTGGCGGCGTATCGCGGCGGGCGGGGTGGTGCTGTTT
GGCCTCAGCGTGCTGGCGCAGGGGGCGGCCTGGCTGCATCAGGCCTGGGTCAGCCAGGACTGGATTGCGTTGGGCGGCTG
TGTGGCCGGAGGCATGATCGTCCTGGCCGGCGTCGGCGCCCTGGCCACCGAATGGCGCCATCTCTACCGGCTGCGCCAAC
GCGCCGAAGAGCGTGAGCTGGCCGCAGACCTGCTGCACAGCCACGCCGTCGGCGGCGGGCGGGCATTCTGCGAACGCCTG
CTGCGCCAGGCCGGGCTGGATGGCAGCCACCCGGCGGTGCAGCGCTGGCAGGCGGCGCTGCACGAGAGCCACAGCGATCG
CGAGGTGGTCTCCCTGTACGCCACGCTGGTACAGCCGGTGCTCGACAGCCAGGCGCGGCGGGAGATCAGCCGCTACGCCG
CCGAGTCGACCCTGATGATCGCCGTCAGCCCGCTGGCGCTGGTGGATATGGCCTTTATCGCCTGGCGCAATCTGCGCCTG
ATCAATCGCATCGCCGCGCTGTACGGCATTGAGCTGGGGTACTACAGCCGCCTGCGCCTGTTCCGCCTGGTGCTGCTGAA
CATCGCCTTTGCCGGCGCCTCGGAGCTGGTGCGGGAGGTGGGCATGGACTGGCTCTCCCAGGATCTGGCGGCCCGGCTGT
CGGCGCGGGCGGCGCAGGGGATCGGTGCCGGACTGTTGACCGCGCGGCTGGGGATCAAGGCGATGGAGCTGTGCCGTCCG
CTGCCGTGGATCGGCGACGATCGCCCGCGTCTGGGGGATTTTCGCCGAGAGCTGATAGCCCAGCTGCGGCGGACGCTGCC
TGCGGCAAAGGCAGAGCGCAGAACCTAG

Upstream 100 bases:

>100_bases
ATTTCGAACAGTTCCGGCCGCAGCGCACGGCGCTGGATACGCCGCTGCCGCATATCCGTATGGATAGCGTGATGGAATTT
TTGCTGGGAGATAAATTACG

Downstream 100 bases:

>100_bases
CCCGCCGCGGGGCTGTGCCCCGGCGGGCTCCGGCTTCCCCCGCCAGCGTAGCCGGGTTACCGCGCAATGGGCAGCGTATC
GTCTGCCCCCCATTCGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNDPIKPRIDFDASLSAEPTPSLQPGMAFDAHQAEAFTPLAPSETEAEQEEGQLEGMVSMALRPRRSLWRRIAAGGVVLF
GLSVLAQGAAWLHQAWVSQDWIALGGCVAGGMIVLAGVGALATEWRHLYRLRQRAEERELAADLLHSHAVGGGRAFCERL
LRQAGLDGSHPAVQRWQAALHESHSDREVVSLYATLVQPVLDSQARREISRYAAESTLMIAVSPLALVDMAFIAWRNLRL
INRIAALYGIELGYYSRLRLFRLVLLNIAFAGASELVREVGMDWLSQDLAARLSARAAQGIGAGLLTARLGIKAMELCRP
LPWIGDDRPRLGDFRRELIAQLRRTLPAAKAERRT

Sequences:

>Translated_355_residues
MNDPIKPRIDFDASLSAEPTPSLQPGMAFDAHQAEAFTPLAPSETEAEQEEGQLEGMVSMALRPRRSLWRRIAAGGVVLF
GLSVLAQGAAWLHQAWVSQDWIALGGCVAGGMIVLAGVGALATEWRHLYRLRQRAEERELAADLLHSHAVGGGRAFCERL
LRQAGLDGSHPAVQRWQAALHESHSDREVVSLYATLVQPVLDSQARREISRYAAESTLMIAVSPLALVDMAFIAWRNLRL
INRIAALYGIELGYYSRLRLFRLVLLNIAFAGASELVREVGMDWLSQDLAARLSARAAQGIGAGLLTARLGIKAMELCRP
LPWIGDDRPRLGDFRRELIAQLRRTLPAAKAERRT
>Mature_355_residues
MNDPIKPRIDFDASLSAEPTPSLQPGMAFDAHQAEAFTPLAPSETEAEQEEGQLEGMVSMALRPRRSLWRRIAAGGVVLF
GLSVLAQGAAWLHQAWVSQDWIALGGCVAGGMIVLAGVGALATEWRHLYRLRQRAEERELAADLLHSHAVGGGRAFCERL
LRQAGLDGSHPAVQRWQAALHESHSDREVVSLYATLVQPVLDSQARREISRYAAESTLMIAVSPLALVDMAFIAWRNLRL
INRIAALYGIELGYYSRLRLFRLVLLNIAFAGASELVREVGMDWLSQDLAARLSARAAQGIGAGLLTARLGIKAMELCRP
LPWIGDDRPRLGDFRRELIAQLRRTLPAAKAERRT

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family [H]

Homologues:

Organism=Escherichia coli, GI1787582, Length=351, Percent_Identity=71.2250712250712, Blast_Score=497, Evalue=1e-142,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021147
- InterPro:   IPR006507 [H]

Pfam domain/function: PF05128 DUF697 [H]

EC number: NA

Molecular weight: Translated: 39091; Mature: 39091

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDPIKPRIDFDASLSAEPTPSLQPGMAFDAHQAEAFTPLAPSETEAEQEEGQLEGMVSM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
ALRPRRSLWRRIAAGGVVLFGLSVLAQGAAWLHQAWVSQDWIALGGCVAGGMIVLAGVGA
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LATEWRHLYRLRQRAEERELAADLLHSHAVGGGRAFCERLLRQAGLDGSHPAVQRWQAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
HESHSDREVVSLYATLVQPVLDSQARREISRYAAESTLMIAVSPLALVDMAFIAWRNLRL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHH
INRIAALYGIELGYYSRLRLFRLVLLNIAFAGASELVREVGMDWLSQDLAARLSARAAQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IGAGLLTARLGIKAMELCRPLPWIGDDRPRLGDFRRELIAQLRRTLPAAKAERRT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCC
>Mature Secondary Structure
MNDPIKPRIDFDASLSAEPTPSLQPGMAFDAHQAEAFTPLAPSETEAEQEEGQLEGMVSM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
ALRPRRSLWRRIAAGGVVLFGLSVLAQGAAWLHQAWVSQDWIALGGCVAGGMIVLAGVGA
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LATEWRHLYRLRQRAEERELAADLLHSHAVGGGRAFCERLLRQAGLDGSHPAVQRWQAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
HESHSDREVVSLYATLVQPVLDSQARREISRYAAESTLMIAVSPLALVDMAFIAWRNLRL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHH
INRIAALYGIELGYYSRLRLFRLVLLNIAFAGASELVREVGMDWLSQDLAARLSARAAQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IGAGLLTARLGIKAMELCRPLPWIGDDRPRLGDFRRELIAQLRRTLPAAKAERRT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA