| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is ycjX [H]
Identifier: 238919732
GI number: 238919732
Start: 1772691
End: 1774091
Strand: Direct
Name: ycjX [H]
Synonym: NT01EI_1836
Alternate gene names: 238919732
Gene position: 1772691-1774091 (Clockwise)
Preceding gene: 238919731
Following gene: 238919733
Centisome position: 46.5
GC content: 64.88
Gene sequence:
>1401_bases ATGAAGAAGAGGCTACAGCACGATATCAACGCGTTGGTTAACCGCGGCCTGGATCGCCATCTGTGTCTGGCGGTCACCGG CCTGAGCCGCAGCGGCAAGACGGCGTTTATTACGTCGCTGGTCAATCAGCTGCTGCATCTCCACAGCGGCGCGCGCCTGC CGCTGTTTTCCGCGGCGCGTGAGGAGCGGATCCTGGGGGTAAAACGGGTGCCGCAGCGTGAGCTGGGGGTGGCCCGTTTC ACCTATGACGAAGGGATGGCTCAGCTGCACGGCGAGCCGCCCGACTGGCCCACGCCGACCCGCGGCGTCAGCGAAATCCG TCTGGCGCTGCGCTACCGCAGTCGGGAGTCGCTGCTGCGCCACTTCAAAGAGACCTCGACGCTGTACCTGGAGATCGTGG ACTACCCCGGCGAATGGCTGCTGGATCTGCCGATGCTCGATCTGCGCTATCTGGCGTGGTCGCGCCAGATGAATGGTCTG CTGCAGGGTGAGCGGCGGACGCTGGCCGGGCCGTTTCTGCGCCTGTGCGCCGCCTGCGATCCGCTGGCGGCGGCGGACGA GCGCCAGCTGGCGGCCATCGCGCAGGCCTATACCGACTATCTGCTGCAGTGCAAACAGCGCGGCCTGCACTTTATTCAGC CGGGTCGCTTTGTGCTGCCGGGGGATATGGCCGGCGCGCCGGCGCTGCAGTTTTTCCCCTGGCCGGGGCTGGATGAGGCG GGTGAGGCCCGCCTGGCCAGCGCCGACCGGCACAGCAATATCGGCATGCTGCGCCAGCGCTACGACTATTACTGCCGCGA AGTGGTGAAGGGGTTTTACCGTCGGCACTTCGCGCGCTTCGACCGCCAGATTGTCCTGGTGGACTGCCTGCAGCCCCTCA ACAGCGGGCCGCAGACGTTTAATGATATGCGGCTGGCCCTCAGCCAGCTGATGCAGAGCTTTAACTACGGTAAGCGCACG CTGTACCGCCGTCTGTTCTCTCCCTGTATCGATCGGCTGATGTTTGCCGCCAGCAAGGCCGACCATGTGACCGCCGACCA GTACGCCAATCTGGTCTCGCTGCTGCAGCAGCTGGTGCAGGATGCCTGGCAAAACGCGGCCTTTGAGGGGATCAGCATGG ACTGTGCCGGCATCGCGGCGATCCAGGCGACTCAGAGCGGCGTGGTGGATCACCAGGGGCAGACGATCCCGGCCCTGCGC GGGGAGCGCCTGAGCGACGGTGCGGCGCTGACGGTGTATCCGGGCGAGGTACCGGCACGCCTGCCGCAGGCCGCATTCTG GCAGAAGCAGGGGTTTCATTTCGAACAGTTCCGGCCGCAGCGCACGGCGCTGGATACGCCGCTGCCGCATATCCGTATGG ATAGCGTGATGGAATTTTTGCTGGGAGATAAATTACGGTGA
Upstream 100 bases:
>100_bases TGGCGCCCGCACTGCGCCGCGGCGTACGCTATGTGACGACGCACCATTTTCAGCAGGATGTCCGGCATGATGTGTCGGCC GGGCAATAGCAAGGAGAAAT
Downstream 100 bases:
>100_bases ACGATCCGATTAAACCGCGCATCGATTTCGATGCGTCGCTGAGCGCAGAGCCGACGCCGTCGCTGCAGCCGGGCATGGCA TTCGACGCGCATCAGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MKKRLQHDINALVNRGLDRHLCLAVTGLSRSGKTAFITSLVNQLLHLHSGARLPLFSAAREERILGVKRVPQRELGVARF TYDEGMAQLHGEPPDWPTPTRGVSEIRLALRYRSRESLLRHFKETSTLYLEIVDYPGEWLLDLPMLDLRYLAWSRQMNGL LQGERRTLAGPFLRLCAACDPLAAADERQLAAIAQAYTDYLLQCKQRGLHFIQPGRFVLPGDMAGAPALQFFPWPGLDEA GEARLASADRHSNIGMLRQRYDYYCREVVKGFYRRHFARFDRQIVLVDCLQPLNSGPQTFNDMRLALSQLMQSFNYGKRT LYRRLFSPCIDRLMFAASKADHVTADQYANLVSLLQQLVQDAWQNAAFEGISMDCAGIAAIQATQSGVVDHQGQTIPALR GERLSDGAALTVYPGEVPARLPQAAFWQKQGFHFEQFRPQRTALDTPLPHIRMDSVMEFLLGDKLR
Sequences:
>Translated_466_residues MKKRLQHDINALVNRGLDRHLCLAVTGLSRSGKTAFITSLVNQLLHLHSGARLPLFSAAREERILGVKRVPQRELGVARF TYDEGMAQLHGEPPDWPTPTRGVSEIRLALRYRSRESLLRHFKETSTLYLEIVDYPGEWLLDLPMLDLRYLAWSRQMNGL LQGERRTLAGPFLRLCAACDPLAAADERQLAAIAQAYTDYLLQCKQRGLHFIQPGRFVLPGDMAGAPALQFFPWPGLDEA GEARLASADRHSNIGMLRQRYDYYCREVVKGFYRRHFARFDRQIVLVDCLQPLNSGPQTFNDMRLALSQLMQSFNYGKRT LYRRLFSPCIDRLMFAASKADHVTADQYANLVSLLQQLVQDAWQNAAFEGISMDCAGIAAIQATQSGVVDHQGQTIPALR GERLSDGAALTVYPGEVPARLPQAAFWQKQGFHFEQFRPQRTALDTPLPHIRMDSVMEFLLGDKLR >Mature_466_residues MKKRLQHDINALVNRGLDRHLCLAVTGLSRSGKTAFITSLVNQLLHLHSGARLPLFSAAREERILGVKRVPQRELGVARF TYDEGMAQLHGEPPDWPTPTRGVSEIRLALRYRSRESLLRHFKETSTLYLEIVDYPGEWLLDLPMLDLRYLAWSRQMNGL LQGERRTLAGPFLRLCAACDPLAAADERQLAAIAQAYTDYLLQCKQRGLHFIQPGRFVLPGDMAGAPALQFFPWPGLDEA GEARLASADRHSNIGMLRQRYDYYCREVVKGFYRRHFARFDRQIVLVDCLQPLNSGPQTFNDMRLALSQLMQSFNYGKRT LYRRLFSPCIDRLMFAASKADHVTADQYANLVSLLQQLVQDAWQNAAFEGISMDCAGIAAIQATQSGVVDHQGQTIPALR GERLSDGAALTVYPGEVPARLPQAAFWQKQGFHFEQFRPQRTALDTPLPHIRMDSVMEFLLGDKLR
Specific function: Unknown
COG id: COG3106
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_1637 [H]
Homologues:
Organism=Escherichia coli, GI1787581, Length=464, Percent_Identity=74.5689655172414, Blast_Score=744, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007413 [H]
Pfam domain/function: PF04317 DUF463 [H]
EC number: NA
Molecular weight: Translated: 52795; Mature: 52795
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRLQHDINALVNRGLDRHLCLAVTGLSRSGKTAFITSLVNQLLHLHSGARLPLFSAAR CCHHHHHHHHHHHHCCCCCEEEHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH EERILGVKRVPQRELGVARFTYDEGMAQLHGEPPDWPTPTRGVSEIRLALRYRSRESLLR HHHHHHHHCCCHHHHCCEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH HFKETSTLYLEIVDYPGEWLLDLPMLDLRYLAWSRQMNGLLQGERRTLAGPFLRLCAACD HHHHCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC PLAAADERQLAAIAQAYTDYLLQCKQRGLHFIQPGRFVLPGDMAGAPALQFFPWPGLDEA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCEEECCCCCCCCC GEARLASADRHSNIGMLRQRYDYYCREVVKGFYRRHFARFDRQIVLVDCLQPLNSGPQTF CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHH NDMRLALSQLMQSFNYGKRTLYRRLFSPCIDRLMFAASKADHVTADQYANLVSLLQQLVQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH DAWQNAAFEGISMDCAGIAAIQATQSGVVDHQGQTIPALRGERLSDGAALTVYPGEVPAR HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHH LPQAAFWQKQGFHFEQFRPQRTALDTPLPHIRMDSVMEFLLGDKLR CCHHHHHHHCCCCHHHCCCHHHHCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MKKRLQHDINALVNRGLDRHLCLAVTGLSRSGKTAFITSLVNQLLHLHSGARLPLFSAAR CCHHHHHHHHHHHHCCCCCEEEHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH EERILGVKRVPQRELGVARFTYDEGMAQLHGEPPDWPTPTRGVSEIRLALRYRSRESLLR HHHHHHHHCCCHHHHCCEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH HFKETSTLYLEIVDYPGEWLLDLPMLDLRYLAWSRQMNGLLQGERRTLAGPFLRLCAACD HHHHCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC PLAAADERQLAAIAQAYTDYLLQCKQRGLHFIQPGRFVLPGDMAGAPALQFFPWPGLDEA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCEEECCCCCCCCC GEARLASADRHSNIGMLRQRYDYYCREVVKGFYRRHFARFDRQIVLVDCLQPLNSGPQTF CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHH NDMRLALSQLMQSFNYGKRTLYRRLFSPCIDRLMFAASKADHVTADQYANLVSLLQQLVQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH DAWQNAAFEGISMDCAGIAAIQATQSGVVDHQGQTIPALRGERLSDGAALTVYPGEVPAR HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHH LPQAAFWQKQGFHFEQFRPQRTALDTPLPHIRMDSVMEFLLGDKLR CCHHHHHHHCCCCHHHCCCHHHHCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]