Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is ycjX [H]

Identifier: 238919732

GI number: 238919732

Start: 1772691

End: 1774091

Strand: Direct

Name: ycjX [H]

Synonym: NT01EI_1836

Alternate gene names: 238919732

Gene position: 1772691-1774091 (Clockwise)

Preceding gene: 238919731

Following gene: 238919733

Centisome position: 46.5

GC content: 64.88

Gene sequence:

>1401_bases
ATGAAGAAGAGGCTACAGCACGATATCAACGCGTTGGTTAACCGCGGCCTGGATCGCCATCTGTGTCTGGCGGTCACCGG
CCTGAGCCGCAGCGGCAAGACGGCGTTTATTACGTCGCTGGTCAATCAGCTGCTGCATCTCCACAGCGGCGCGCGCCTGC
CGCTGTTTTCCGCGGCGCGTGAGGAGCGGATCCTGGGGGTAAAACGGGTGCCGCAGCGTGAGCTGGGGGTGGCCCGTTTC
ACCTATGACGAAGGGATGGCTCAGCTGCACGGCGAGCCGCCCGACTGGCCCACGCCGACCCGCGGCGTCAGCGAAATCCG
TCTGGCGCTGCGCTACCGCAGTCGGGAGTCGCTGCTGCGCCACTTCAAAGAGACCTCGACGCTGTACCTGGAGATCGTGG
ACTACCCCGGCGAATGGCTGCTGGATCTGCCGATGCTCGATCTGCGCTATCTGGCGTGGTCGCGCCAGATGAATGGTCTG
CTGCAGGGTGAGCGGCGGACGCTGGCCGGGCCGTTTCTGCGCCTGTGCGCCGCCTGCGATCCGCTGGCGGCGGCGGACGA
GCGCCAGCTGGCGGCCATCGCGCAGGCCTATACCGACTATCTGCTGCAGTGCAAACAGCGCGGCCTGCACTTTATTCAGC
CGGGTCGCTTTGTGCTGCCGGGGGATATGGCCGGCGCGCCGGCGCTGCAGTTTTTCCCCTGGCCGGGGCTGGATGAGGCG
GGTGAGGCCCGCCTGGCCAGCGCCGACCGGCACAGCAATATCGGCATGCTGCGCCAGCGCTACGACTATTACTGCCGCGA
AGTGGTGAAGGGGTTTTACCGTCGGCACTTCGCGCGCTTCGACCGCCAGATTGTCCTGGTGGACTGCCTGCAGCCCCTCA
ACAGCGGGCCGCAGACGTTTAATGATATGCGGCTGGCCCTCAGCCAGCTGATGCAGAGCTTTAACTACGGTAAGCGCACG
CTGTACCGCCGTCTGTTCTCTCCCTGTATCGATCGGCTGATGTTTGCCGCCAGCAAGGCCGACCATGTGACCGCCGACCA
GTACGCCAATCTGGTCTCGCTGCTGCAGCAGCTGGTGCAGGATGCCTGGCAAAACGCGGCCTTTGAGGGGATCAGCATGG
ACTGTGCCGGCATCGCGGCGATCCAGGCGACTCAGAGCGGCGTGGTGGATCACCAGGGGCAGACGATCCCGGCCCTGCGC
GGGGAGCGCCTGAGCGACGGTGCGGCGCTGACGGTGTATCCGGGCGAGGTACCGGCACGCCTGCCGCAGGCCGCATTCTG
GCAGAAGCAGGGGTTTCATTTCGAACAGTTCCGGCCGCAGCGCACGGCGCTGGATACGCCGCTGCCGCATATCCGTATGG
ATAGCGTGATGGAATTTTTGCTGGGAGATAAATTACGGTGA

Upstream 100 bases:

>100_bases
TGGCGCCCGCACTGCGCCGCGGCGTACGCTATGTGACGACGCACCATTTTCAGCAGGATGTCCGGCATGATGTGTCGGCC
GGGCAATAGCAAGGAGAAAT

Downstream 100 bases:

>100_bases
ACGATCCGATTAAACCGCGCATCGATTTCGATGCGTCGCTGAGCGCAGAGCCGACGCCGTCGCTGCAGCCGGGCATGGCA
TTCGACGCGCATCAGGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MKKRLQHDINALVNRGLDRHLCLAVTGLSRSGKTAFITSLVNQLLHLHSGARLPLFSAAREERILGVKRVPQRELGVARF
TYDEGMAQLHGEPPDWPTPTRGVSEIRLALRYRSRESLLRHFKETSTLYLEIVDYPGEWLLDLPMLDLRYLAWSRQMNGL
LQGERRTLAGPFLRLCAACDPLAAADERQLAAIAQAYTDYLLQCKQRGLHFIQPGRFVLPGDMAGAPALQFFPWPGLDEA
GEARLASADRHSNIGMLRQRYDYYCREVVKGFYRRHFARFDRQIVLVDCLQPLNSGPQTFNDMRLALSQLMQSFNYGKRT
LYRRLFSPCIDRLMFAASKADHVTADQYANLVSLLQQLVQDAWQNAAFEGISMDCAGIAAIQATQSGVVDHQGQTIPALR
GERLSDGAALTVYPGEVPARLPQAAFWQKQGFHFEQFRPQRTALDTPLPHIRMDSVMEFLLGDKLR

Sequences:

>Translated_466_residues
MKKRLQHDINALVNRGLDRHLCLAVTGLSRSGKTAFITSLVNQLLHLHSGARLPLFSAAREERILGVKRVPQRELGVARF
TYDEGMAQLHGEPPDWPTPTRGVSEIRLALRYRSRESLLRHFKETSTLYLEIVDYPGEWLLDLPMLDLRYLAWSRQMNGL
LQGERRTLAGPFLRLCAACDPLAAADERQLAAIAQAYTDYLLQCKQRGLHFIQPGRFVLPGDMAGAPALQFFPWPGLDEA
GEARLASADRHSNIGMLRQRYDYYCREVVKGFYRRHFARFDRQIVLVDCLQPLNSGPQTFNDMRLALSQLMQSFNYGKRT
LYRRLFSPCIDRLMFAASKADHVTADQYANLVSLLQQLVQDAWQNAAFEGISMDCAGIAAIQATQSGVVDHQGQTIPALR
GERLSDGAALTVYPGEVPARLPQAAFWQKQGFHFEQFRPQRTALDTPLPHIRMDSVMEFLLGDKLR
>Mature_466_residues
MKKRLQHDINALVNRGLDRHLCLAVTGLSRSGKTAFITSLVNQLLHLHSGARLPLFSAAREERILGVKRVPQRELGVARF
TYDEGMAQLHGEPPDWPTPTRGVSEIRLALRYRSRESLLRHFKETSTLYLEIVDYPGEWLLDLPMLDLRYLAWSRQMNGL
LQGERRTLAGPFLRLCAACDPLAAADERQLAAIAQAYTDYLLQCKQRGLHFIQPGRFVLPGDMAGAPALQFFPWPGLDEA
GEARLASADRHSNIGMLRQRYDYYCREVVKGFYRRHFARFDRQIVLVDCLQPLNSGPQTFNDMRLALSQLMQSFNYGKRT
LYRRLFSPCIDRLMFAASKADHVTADQYANLVSLLQQLVQDAWQNAAFEGISMDCAGIAAIQATQSGVVDHQGQTIPALR
GERLSDGAALTVYPGEVPARLPQAAFWQKQGFHFEQFRPQRTALDTPLPHIRMDSVMEFLLGDKLR

Specific function: Unknown

COG id: COG3106

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1637 [H]

Homologues:

Organism=Escherichia coli, GI1787581, Length=464, Percent_Identity=74.5689655172414, Blast_Score=744, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007413 [H]

Pfam domain/function: PF04317 DUF463 [H]

EC number: NA

Molecular weight: Translated: 52795; Mature: 52795

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRLQHDINALVNRGLDRHLCLAVTGLSRSGKTAFITSLVNQLLHLHSGARLPLFSAAR
CCHHHHHHHHHHHHCCCCCEEEHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
EERILGVKRVPQRELGVARFTYDEGMAQLHGEPPDWPTPTRGVSEIRLALRYRSRESLLR
HHHHHHHHCCCHHHHCCEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
HFKETSTLYLEIVDYPGEWLLDLPMLDLRYLAWSRQMNGLLQGERRTLAGPFLRLCAACD
HHHHCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PLAAADERQLAAIAQAYTDYLLQCKQRGLHFIQPGRFVLPGDMAGAPALQFFPWPGLDEA
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCEEECCCCCCCCC
GEARLASADRHSNIGMLRQRYDYYCREVVKGFYRRHFARFDRQIVLVDCLQPLNSGPQTF
CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHH
NDMRLALSQLMQSFNYGKRTLYRRLFSPCIDRLMFAASKADHVTADQYANLVSLLQQLVQ
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
DAWQNAAFEGISMDCAGIAAIQATQSGVVDHQGQTIPALRGERLSDGAALTVYPGEVPAR
HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHH
LPQAAFWQKQGFHFEQFRPQRTALDTPLPHIRMDSVMEFLLGDKLR
CCHHHHHHHCCCCHHHCCCHHHHCCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKRLQHDINALVNRGLDRHLCLAVTGLSRSGKTAFITSLVNQLLHLHSGARLPLFSAAR
CCHHHHHHHHHHHHCCCCCEEEHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
EERILGVKRVPQRELGVARFTYDEGMAQLHGEPPDWPTPTRGVSEIRLALRYRSRESLLR
HHHHHHHHCCCHHHHCCEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
HFKETSTLYLEIVDYPGEWLLDLPMLDLRYLAWSRQMNGLLQGERRTLAGPFLRLCAACD
HHHHCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PLAAADERQLAAIAQAYTDYLLQCKQRGLHFIQPGRFVLPGDMAGAPALQFFPWPGLDEA
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCEEECCCCCCCCC
GEARLASADRHSNIGMLRQRYDYYCREVVKGFYRRHFARFDRQIVLVDCLQPLNSGPQTF
CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHH
NDMRLALSQLMQSFNYGKRTLYRRLFSPCIDRLMFAASKADHVTADQYANLVSLLQQLVQ
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
DAWQNAAFEGISMDCAGIAAIQATQSGVVDHQGQTIPALRGERLSDGAALTVYPGEVPAR
HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHH
LPQAAFWQKQGFHFEQFRPQRTALDTPLPHIRMDSVMEFLLGDKLR
CCHHHHHHHCCCCHHHCCCHHHHCCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]