| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is nagZ
Identifier: 238919709
GI number: 238919709
Start: 1748819
End: 1749841
Strand: Direct
Name: nagZ
Synonym: NT01EI_1812
Alternate gene names: 238919709
Gene position: 1748819-1749841 (Clockwise)
Preceding gene: 238919708
Following gene: 238919710
Centisome position: 45.87
GC content: 62.95
Gene sequence:
>1023_bases GTGGGTCCTGTAATGCTGGATGTTGTCGGCCATGAGCTGGATGCCGAGGAGCGTGAGATCCTGGATCATCCGTTGGTCGG TGGCGTGATCCTGTTTAGCCGTAATTTTGACGATCCGGCACAGCTGCGTGAGCTGGTGCGCCAAATCCGCCAGGCGGCAC GCCACCCTTTACTGGTGACCGTCGATCAGGAGGGGGGACGGGTGCAGCGCTTCCATCAGGGGTTTACCCGCCTGCCGGCA GCGCAGTCCTATGCCGCGCTCAACACGCCGCAGGAGGCGCAGCGTCTGGCGTTGGAGGGCGGCTGGCTGATGGCCTGCGA GATGATCGCCATGGATATCGATCTGAGTTTTGCCCCGGTGCTGGATTTGGGGCACGGCAGTGCCGCCATCGGCGAACGTG CGTTCCACCGGGAGGCAGAGAGCGCCATTCCGCTGGCGCAGGCGTTTATCGACGGGATGCACCAGGCGGGAATGAAGGCG ACCGGCAAGCATTTTCCGGGGCATGGCAAGGTGAGTGCGGACTCCCATAAAGAGACGCCGATCGACGCGCGTCCGCTGGT GCAAATCGTTGAGCATGATATGGTTATTTTCAGGACGCTGAATGCGTGCGGCAAGCTGGATGCGGTCATGCCTGCCCACG TGATCTATTCACAGGCGGATTCCCGCCCGGCCAGCGGCTCACCCTACTGGCTGCAGCAGGTACTGCGCCAGACCCTGGGC TTCGAGGGGGTGGTCTTCTCGGACGATCTATCGATGAACGGCGCCGCGGTGATGGGCAGCTATGCGCAGCGGGCGCAAGC GTCTCTGGATGCCGGCTGCGATATGGTGCTGGTATGCAATAACCGCCAGGGTGCTATCAGCGTGCTGGACCACCTGTCTG CTGCGGGGTCACCGCGTATTGCCCGCCTGCGTCACCGTGGTCAGGTTGATCGCGAGGGGCTGATGGGCAGCGCGCGCTGG AAGCAGGCGCATCAGGATTTGCAACGCTTACACCAGCGTTGGGAGGAGGCCAAACAGGCCTGA
Upstream 100 bases:
>100_bases GACCCAACAACCTATTTACCGTCAGCAGGCCGATGTCCTGCTGCGCAATTTAACCCAATAATCCATGCGGCGCGCGGCGC CGCCAGAGAGGAGACGTCGT
Downstream 100 bases:
>100_bases GATCTGGCGCCGGATAACTTATCAGGTGCGGGGCCGCCGCCGTGTGCGGCGTTGATGACACGTGCGGGAGACCGCTTAGG GAGACGTATGATTATTTATT
Product: beta-hexosaminidase
Products: NA
Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MGPVMLDVVGHELDAEEREILDHPLVGGVILFSRNFDDPAQLRELVRQIRQAARHPLLVTVDQEGGRVQRFHQGFTRLPA AQSYAALNTPQEAQRLALEGGWLMACEMIAMDIDLSFAPVLDLGHGSAAIGERAFHREAESAIPLAQAFIDGMHQAGMKA TGKHFPGHGKVSADSHKETPIDARPLVQIVEHDMVIFRTLNACGKLDAVMPAHVIYSQADSRPASGSPYWLQQVLRQTLG FEGVVFSDDLSMNGAAVMGSYAQRAQASLDAGCDMVLVCNNRQGAISVLDHLSAAGSPRIARLRHRGQVDREGLMGSARW KQAHQDLQRLHQRWEEAKQA
Sequences:
>Translated_340_residues MGPVMLDVVGHELDAEEREILDHPLVGGVILFSRNFDDPAQLRELVRQIRQAARHPLLVTVDQEGGRVQRFHQGFTRLPA AQSYAALNTPQEAQRLALEGGWLMACEMIAMDIDLSFAPVLDLGHGSAAIGERAFHREAESAIPLAQAFIDGMHQAGMKA TGKHFPGHGKVSADSHKETPIDARPLVQIVEHDMVIFRTLNACGKLDAVMPAHVIYSQADSRPASGSPYWLQQVLRQTLG FEGVVFSDDLSMNGAAVMGSYAQRAQASLDAGCDMVLVCNNRQGAISVLDHLSAAGSPRIARLRHRGQVDREGLMGSARW KQAHQDLQRLHQRWEEAKQA >Mature_339_residues GPVMLDVVGHELDAEEREILDHPLVGGVILFSRNFDDPAQLRELVRQIRQAARHPLLVTVDQEGGRVQRFHQGFTRLPAA QSYAALNTPQEAQRLALEGGWLMACEMIAMDIDLSFAPVLDLGHGSAAIGERAFHREAESAIPLAQAFIDGMHQAGMKAT GKHFPGHGKVSADSHKETPIDARPLVQIVEHDMVIFRTLNACGKLDAVMPAHVIYSQADSRPASGSPYWLQQVLRQTLGF EGVVFSDDLSMNGAAVMGSYAQRAQASLDAGCDMVLVCNNRQGAISVLDHLSAAGSPRIARLRHRGQVDREGLMGSARWK QAHQDLQRLHQRWEEAKQA
Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily
Homologues:
Organism=Escherichia coli, GI1787350, Length=338, Percent_Identity=69.5266272189349, Blast_Score=494, Evalue=1e-141,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NAGZ_EDWI9 (C5BFM6)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002933224.1 - GeneID: 7962133 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_1812 - OMA: DLTMEGA - ProtClustDB: PRK05337 - GO: GO:0005737 - HAMAP: MF_00364 - InterPro: IPR022956 - InterPro: IPR001764 - InterPro: IPR017853 - Gene3D: G3DSA:3.20.20.300
Pfam domain/function: PF00933 Glyco_hydro_3; SSF51445 Glyco_hydro_cat
EC number: =3.2.1.52
Molecular weight: Translated: 37277; Mature: 37146
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: ACT_SITE 248-248
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPVMLDVVGHELDAEEREILDHPLVGGVILFSRNFDDPAQLRELVRQIRQAARHPLLVT CCCEEEEECCCCCCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEE VDQEGGRVQRFHQGFTRLPAAQSYAALNTPQEAQRLALEGGWLMACEMIAMDIDLSFAPV EECCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHH LDLGHGSAAIGERAFHREAESAIPLAQAFIDGMHQAGMKATGKHFPGHGKVSADSHKETP EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC IDARPLVQIVEHDMVIFRTLNACGKLDAVMPAHVIYSQADSRPASGSPYWLQQVLRQTLG CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC FEGVVFSDDLSMNGAAVMGSYAQRAQASLDAGCDMVLVCNNRQGAISVLDHLSAAGSPRI CCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCHH ARLRHRGQVDREGLMGSARWKQAHQDLQRLHQRWEEAKQA HHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GPVMLDVVGHELDAEEREILDHPLVGGVILFSRNFDDPAQLRELVRQIRQAARHPLLVT CCEEEEECCCCCCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEE VDQEGGRVQRFHQGFTRLPAAQSYAALNTPQEAQRLALEGGWLMACEMIAMDIDLSFAPV EECCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHH LDLGHGSAAIGERAFHREAESAIPLAQAFIDGMHQAGMKATGKHFPGHGKVSADSHKETP EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC IDARPLVQIVEHDMVIFRTLNACGKLDAVMPAHVIYSQADSRPASGSPYWLQQVLRQTLG CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC FEGVVFSDDLSMNGAAVMGSYAQRAQASLDAGCDMVLVCNNRQGAISVLDHLSAAGSPRI CCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCHH ARLRHRGQVDREGLMGSARWKQAHQDLQRLHQRWEEAKQA HHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA