| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is thiK [H]
Identifier: 238919708
GI number: 238919708
Start: 1748390
End: 1748779
Strand: Direct
Name: thiK [H]
Synonym: NT01EI_1811
Alternate gene names: 238919708
Gene position: 1748390-1748779 (Clockwise)
Preceding gene: 238919707
Following gene: 238919709
Centisome position: 45.86
GC content: 62.56
Gene sequence:
>390_bases GTGCACCGCCGCTGGCAGCGCCGCCGTGAGCCGCGGCCCCTTAAGCTGGCGCTGCTGCATATGGATATTCACGATGGCAA TCTGATCGACGCCGACGGTGCCGTGGGGCTGATCGACTGGGAGTATGCCGCCAGCGGCGATATCGCGCTGGATTTGGCGG CGCTGAGCCGTAACTATGCCCTGAACGGCGCCGGACGGGCCGGGCTGGTCGCAGCCTACTGTCGTCATGGGGGCTATAGT GACGCCGCACGTCTGCTGCATCAGCTGAATCGCTGGCTGGGCTGGGTGGACTATATGGCCTGGCTGTGGTTTGAGTTGCG CTGGCAGCAGACCCAACAACCTATTTACCGTCAGCAGGCCGATGTCCTGCTGCGCAATTTAACCCAATAA
Upstream 100 bases:
>100_bases CCGCCTGCCGCCGCGTCTGACAGCGCGCTCGCTGCGGCGCTATTGCGCCGCCTACTGGGCGCAGCTGGCGCCCGGGCGCC GCGGATTTCTGGCGCAGCGC
Downstream 100 bases:
>100_bases TCCATGCGGCGCGCGGCGCCGCCAGAGAGGAGACGTCGTGTGGGTCCTGTAATGCTGGATGTTGTCGGCCATGAGCTGGA TGCCGAGGAGCGTGAGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MHRRWQRRREPRPLKLALLHMDIHDGNLIDADGAVGLIDWEYAASGDIALDLAALSRNYALNGAGRAGLVAAYCRHGGYS DAARLLHQLNRWLGWVDYMAWLWFELRWQQTQQPIYRQQADVLLRNLTQ
Sequences:
>Translated_129_residues MHRRWQRRREPRPLKLALLHMDIHDGNLIDADGAVGLIDWEYAASGDIALDLAALSRNYALNGAGRAGLVAAYCRHGGYS DAARLLHQLNRWLGWVDYMAWLWFELRWQQTQQPIYRQQADVLLRNLTQ >Mature_129_residues MHRRWQRRREPRPLKLALLHMDIHDGNLIDADGAVGLIDWEYAASGDIALDLAALSRNYALNGAGRAGLVAAYCRHGGYS DAARLLHQLNRWLGWVDYMAWLWFELRWQQTQQPIYRQQADVLLRNLTQ
Specific function: Catalyzes the phosphorylation of thiamine to thiamine phosphate [H]
COG id: COG0510
COG function: function code M; Predicted choline kinase involved in LPS biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine kinase family [H]
Homologues:
Organism=Escherichia coli, GI1787349, Length=127, Percent_Identity=41.7322834645669, Blast_Score=88, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR014093 [H]
Pfam domain/function: PF01636 APH [H]
EC number: =2.7.1.89 [H]
Molecular weight: Translated: 14966; Mature: 14966
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRRWQRRREPRPLKLALLHMDIHDGNLIDADGAVGLIDWEYAASGDIALDLAALSRNYA CCCCHHHHCCCCCEEEEEEEEECCCCCEECCCCCEEEEEECCCCCCCCEEHHHHHHCCCC LNGAGRAGLVAAYCRHGGYSDAARLLHQLNRWLGWVDYMAWLWFELRWQQTQQPIYRQQA CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH DVLLRNLTQ HHHHHHCCC >Mature Secondary Structure MHRRWQRRREPRPLKLALLHMDIHDGNLIDADGAVGLIDWEYAASGDIALDLAALSRNYA CCCCHHHHCCCCCEEEEEEEEECCCCCEECCCCCEEEEEECCCCCCCCEEHHHHHHCCCC LNGAGRAGLVAAYCRHGGYSDAARLLHQLNRWLGWVDYMAWLWFELRWQQTQQPIYRQQA CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH DVLLRNLTQ HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA