| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238919702
Identifier: 238919702
GI number: 238919702
Start: 1744731
End: 1744964
Strand: Reverse
Name: 238919702
Synonym: NT01EI_1805
Alternate gene names: NA
Gene position: 1744964-1744731 (Counterclockwise)
Preceding gene: 238919711
Following gene: 238919701
Centisome position: 45.77
GC content: 48.72
Gene sequence:
>234_bases GTGCATCATCCCCATGCCATTACCATTACCCGTGCCATTCTGCGCCTGCGCGGCGGTACTATCGGCCGCATTCGCCGCGC CAACGCCCAACGCCAGGGTCGAAGCAAGAAGGAGTGCCGTCATTTTTACGCATTGAGAATTCCTCTGTATCAATTTATGT TCGGTAATTTCGCCGTGTGTCTGGAAATAAATTTAGCGGAAAAGAGTTCAAGTACTTATATCCAGTGTAAATAA
Upstream 100 bases:
>100_bases TGTCGCGGATCTGCTGGCGCTGCTCCGGCGTCAGCTGGATCCCGGCCAGCATGCCGCCGTCGTGCCGGGCGCCTTTTTTC TGCATCATCTGATTTTGATG
Downstream 100 bases:
>100_bases CTGAAAGCAGAATTACGCGAAATAGCTTAATTATGGATTAATTATGAAGAGTCGGGATAAAATTGGCTATTGCGCTGGCG TATCCCCTGCCACCACCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MHHPHAITITRAILRLRGGTIGRIRRANAQRQGRSKKECRHFYALRIPLYQFMFGNFAVCLEINLAEKSSSTYIQCK
Sequences:
>Translated_77_residues MHHPHAITITRAILRLRGGTIGRIRRANAQRQGRSKKECRHFYALRIPLYQFMFGNFAVCLEINLAEKSSSTYIQCK >Mature_77_residues MHHPHAITITRAILRLRGGTIGRIRRANAQRQGRSKKECRHFYALRIPLYQFMFGNFAVCLEINLAEKSSSTYIQCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8947; Mature: 8947
Theoretical pI: Translated: 11.46; Mature: 11.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHPHAITITRAILRLRGGTIGRIRRANAQRQGRSKKECRHFYALRIPLYQFMFGNFAVC CCCCCHHHHHHHHHHHCCCCCCHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEE LEINLAEKSSSTYIQCK EEEEECCCCCCCEEEEC >Mature Secondary Structure MHHPHAITITRAILRLRGGTIGRIRRANAQRQGRSKKECRHFYALRIPLYQFMFGNFAVC CCCCCHHHHHHHHHHHCCCCCCHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEE LEINLAEKSSSTYIQCK EEEEECCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA