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The map label for this gene is yebR [H]

Identifier: 238919692

GI number: 238919692

Start: 1736586

End: 1737077

Strand: Direct

Name: yebR [H]

Synonym: NT01EI_1795

Alternate gene names: 238919692

Gene position: 1736586-1737077 (Clockwise)

Preceding gene: 238919689

Following gene: 238919693

Centisome position: 45.55

GC content: 57.11

Gene sequence:

>492_bases
ATGAGTAAAGATACGTTTTATACCGATATGGCCCGCGATCTGAGCGCGCTTTGCAGCGGTGAGTTCAACGCGATCGCCAC
GCTGTCCAACGTGAGTGCCTTACTGTATGAGCGCCTGCCGGCGGTGAACTGGGCCGGGTTTTATTTTCTGGATGGGCAGA
TGTTGGTGCTGGGGCCGTTTCAGGGCAAGGTGGCCTGCGTACGCATTCCTGTGGGAAAAGGGGTCTGCGGTACGGCCTGC
GCTACGGGTCAGGTACAACGCGTTGGGGATGTGCACTGCTTCAGGGGCCACATCGCCTGTGACGCCGCGAGCAATGCGGA
AATTGTGCTGCCGCTGGTGGTCGGAGGACGGACGATCGGAGTGCTGGATATTGATAGCACACAGTTTGAGCGCTTCGACG
AAGAAGATGAAAAAGGTCTGAAAAGCGTGGTGGGCGCGCTCTGCCAGCATCTGGAGCGCTGCGACTGGGCAAAATTTGTG
ACATTTGCTTAA

Upstream 100 bases:

>100_bases
GCTATTCGGCTTTTTGCTTGTGTGTTGTCGCATTTAATGCTTATTTTATGAGAGCTGTGCCCGAACAGGTCTATGGGATC
CTATCGTCACTGAGATAATC

Downstream 100 bases:

>100_bases
GGTTGTGGTGCTGATGGCATGGTATTTGGCGGTAGCCTCATTATAATGTCGCCTGTTCATGCCATCGCTGGTTGGCAAAC
CCGTTGTAATCAGGAAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSKDTFYTDMARDLSALCSGEFNAIATLSNVSALLYERLPAVNWAGFYFLDGQMLVLGPFQGKVACVRIPVGKGVCGTAC
ATGQVQRVGDVHCFRGHIACDAASNAEIVLPLVVGGRTIGVLDIDSTQFERFDEEDEKGLKSVVGALCQHLERCDWAKFV
TFA

Sequences:

>Translated_163_residues
MSKDTFYTDMARDLSALCSGEFNAIATLSNVSALLYERLPAVNWAGFYFLDGQMLVLGPFQGKVACVRIPVGKGVCGTAC
ATGQVQRVGDVHCFRGHIACDAASNAEIVLPLVVGGRTIGVLDIDSTQFERFDEEDEKGLKSVVGALCQHLERCDWAKFV
TFA
>Mature_162_residues
SKDTFYTDMARDLSALCSGEFNAIATLSNVSALLYERLPAVNWAGFYFLDGQMLVLGPFQGKVACVRIPVGKGVCGTACA
TGQVQRVGDVHCFRGHIACDAASNAEIVLPLVVGGRTIGVLDIDSTQFERFDEEDEKGLKSVVGALCQHLERCDWAKFVT
FA

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=159, Percent_Identity=64.7798742138365, Blast_Score=216, Evalue=4e-58,
Organism=Saccharomyces cerevisiae, GI6322781, Length=151, Percent_Identity=41.0596026490066, Blast_Score=121, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 17601; Mature: 17470

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDTFYTDMARDLSALCSGEFNAIATLSNVSALLYERLPAVNWAGFYFLDGQMLVLGPF
CCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEECC
QGKVACVRIPVGKGVCGTACATGQVQRVGDVHCFRGHIACDAASNAEIVLPLVVGGRTIG
CCCEEEEEEECCCCCCCCCCCCCCHHHCCCEEEEECEEEECCCCCCEEEEEEEECCEEEE
VLDIDSTQFERFDEEDEKGLKSVVGALCQHLERCDWAKFVTFA
EEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHEECC
>Mature Secondary Structure 
SKDTFYTDMARDLSALCSGEFNAIATLSNVSALLYERLPAVNWAGFYFLDGQMLVLGPF
CCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEECC
QGKVACVRIPVGKGVCGTACATGQVQRVGDVHCFRGHIACDAASNAEIVLPLVVGGRTIG
CCCEEEEEEECCCCCCCCCCCCCCHHHCCCEEEEECEEEECCCCCCEEEEEEEECCEEEE
VLDIDSTQFERFDEEDEKGLKSVVGALCQHLERCDWAKFVTFA
EEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]