Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is ycgJ [H]

Identifier: 238919689

GI number: 238919689

Start: 1731481

End: 1731810

Strand: Direct

Name: ycgJ [H]

Synonym: NT01EI_1792

Alternate gene names: 238919689

Gene position: 1731481-1731810 (Clockwise)

Preceding gene: 238919688

Following gene: 238919692

Centisome position: 45.42

GC content: 60.3

Gene sequence:

>330_bases
GTGCTGCTGGTGCTGCCAGCGGTAGCGCCAGCAGCACAGCCGGAGGCACTGCGATCGCCGCGGGTCGGCGTACTGTGCGA
TCGTTATTTCTGTGCGGACAGCCGGGGAATTTCCCGGCCCCTAACGGAGCAATATCTGGGGCGGACGGTGGCGAAGAGGC
TATTTTCGCAGGGTGACTTTGACCTGACCCAGTTCACCTTTGCCAACGGAATTTTTTGCGATACCCGCGAGCGTCTGTGC
CGGATGGATCGCTACTACGGCCCCGACGGTAAACACAGCGGTGCCGTTTCGGCACAATATACGGTGCTGCTGTTTCCCCG
CGGAGTTTAA

Upstream 100 bases:

>100_bases
GGCCGTCGCGTAAATGGCGTTTCGTGGGTATTGGCTACCGTTTTTAAGCCTGAGGATGTAAGGGGGTTAGGTGAGACAAG
TCTGCCGATGGTTTTTCGCT

Downstream 100 bases:

>100_bases
CCGGGCTGACCCGATCGCCGGTTACCGATCGCTGATGACGGCGTCACGGATCTCATAGCGCGTGGCCTGTGCGGATCAGA
AACCGATCGCCTTTTTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MLLVLPAVAPAAQPEALRSPRVGVLCDRYFCADSRGISRPLTEQYLGRTVAKRLFSQGDFDLTQFTFANGIFCDTRERLC
RMDRYYGPDGKHSGAVSAQYTVLLFPRGV

Sequences:

>Translated_109_residues
MLLVLPAVAPAAQPEALRSPRVGVLCDRYFCADSRGISRPLTEQYLGRTVAKRLFSQGDFDLTQFTFANGIFCDTRERLC
RMDRYYGPDGKHSGAVSAQYTVLLFPRGV
>Mature_109_residues
MLLVLPAVAPAAQPEALRSPRVGVLCDRYFCADSRGISRPLTEQYLGRTVAKRLFSQGDFDLTQFTFANGIFCDTRERLC
RMDRYYGPDGKHSGAVSAQYTVLLFPRGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787425, Length=103, Percent_Identity=46.6019417475728, Blast_Score=105, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008617 [H]

Pfam domain/function: PF05666 Fels1 [H]

EC number: NA

Molecular weight: Translated: 12165; Mature: 12165

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLVLPAVAPAAQPEALRSPRVGVLCDRYFCADSRGISRPLTEQYLGRTVAKRLFSQGDF
CEEEECCCCCCCCCHHHCCCCCCEEECCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
DLTQFTFANGIFCDTRERLCRMDRYYGPDGKHSGAVSAQYTVLLFPRGV
CHHHHHHCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MLLVLPAVAPAAQPEALRSPRVGVLCDRYFCADSRGISRPLTEQYLGRTVAKRLFSQGDF
CEEEECCCCCCCCCHHHCCCCCCEEECCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
DLTQFTFANGIFCDTRERLCRMDRYYGPDGKHSGAVSAQYTVLLFPRGV
CHHHHHHCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]