Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919678

Identifier: 238919678

GI number: 238919678

Start: 1723398

End: 1723952

Strand: Direct

Name: 238919678

Synonym: NT01EI_1779

Alternate gene names: NA

Gene position: 1723398-1723952 (Clockwise)

Preceding gene: 238919677

Following gene: 238919681

Centisome position: 45.21

GC content: 59.28

Gene sequence:

>555_bases
ATGTTCAGAACGCTTTTGGTGGCATCGCTGCTGACCCTGGGGGGGTGTGCCGATGCATCCATTGTTATCAATAATATCGA
CAATAGTTCTGGGTACCGCGGCGGACAGGGCAGCGGGCAGATCTATATTTGCATGCTCACGCCATTCAGCAGCCTCTATG
CCGACGCCGCGCGCAGCGAGCAGATTGCCCGCTATAAGGTGGGGCAGCGCTGTGAGCGGGGGCAGGGAGAGGGTAGCCTT
TTCTGTCGGCCTAAGGATGCCAGCTGCAGCACCACGACGCTGGATGAGGGCTACAGCCAGGGCGCCGATCGCCTGATGGT
GTATGAGGATTCGAGTCAGCGCGGGGCTTCGCTGAGCATTGATCGCGATATTCCCGATCTTTCCCGCTACCGTTTTGCCG
ATCGTATCTCCTCGTTCTCGGTGCCGCAGGGGTGGACGGTGCGTTTCTACGAAGGGACTGACTACAGCGGGGGATACTAT
ACCCGCAGCGGCGGAGAGCAGGAGGCGACCGGGTTTAACGACCACATCCGCTCTATCCGGATCCTGAACCGTTAA

Upstream 100 bases:

>100_bases
CTTAATTCCCTGCGCCGGGCTATTAGGTACTATGAACTTCCGCCGCTGCTCTACGTGCGACGGGCTGCCGTAACAGTATA
CTTATCAGATAGGAGTACTT

Downstream 100 bases:

>100_bases
CCCCGGATGCACAGGGCGGCATCGTGCCCGCCGTCCTGCCGGGCTTCAGCGCTGCCCGGCCAGTGTGGTGCCGCTGCCGT
GAGAGATGGGCTGGCGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MFRTLLVASLLTLGGCADASIVINNIDNSSGYRGGQGSGQIYICMLTPFSSLYADAARSEQIARYKVGQRCERGQGEGSL
FCRPKDASCSTTTLDEGYSQGADRLMVYEDSSQRGASLSIDRDIPDLSRYRFADRISSFSVPQGWTVRFYEGTDYSGGYY
TRSGGEQEATGFNDHIRSIRILNR

Sequences:

>Translated_184_residues
MFRTLLVASLLTLGGCADASIVINNIDNSSGYRGGQGSGQIYICMLTPFSSLYADAARSEQIARYKVGQRCERGQGEGSL
FCRPKDASCSTTTLDEGYSQGADRLMVYEDSSQRGASLSIDRDIPDLSRYRFADRISSFSVPQGWTVRFYEGTDYSGGYY
TRSGGEQEATGFNDHIRSIRILNR
>Mature_184_residues
MFRTLLVASLLTLGGCADASIVINNIDNSSGYRGGQGSGQIYICMLTPFSSLYADAARSEQIARYKVGQRCERGQGEGSL
FCRPKDASCSTTTLDEGYSQGADRLMVYEDSSQRGASLSIDRDIPDLSRYRFADRISSFSVPQGWTVRFYEGTDYSGGYY
TRSGGEQEATGFNDHIRSIRILNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20274; Mature: 20274

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50915 CRYSTALLIN_BETA_GAMMA L=rr

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRTLLVASLLTLGGCADASIVINNIDNSSGYRGGQGSGQIYICMLTPFSSLYADAARSE
CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHH
QIARYKVGQRCERGQGEGSLFCRPKDASCSTTTLDEGYSQGADRLMVYEDSSQRGASLSI
HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEE
DRDIPDLSRYRFADRISSFSVPQGWTVRFYEGTDYSGGYYTRSGGEQEATGFNDHIRSIR
CCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHEEE
ILNR
EECC
>Mature Secondary Structure
MFRTLLVASLLTLGGCADASIVINNIDNSSGYRGGQGSGQIYICMLTPFSSLYADAARSE
CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHH
QIARYKVGQRCERGQGEGSLFCRPKDASCSTTTLDEGYSQGADRLMVYEDSSQRGASLSI
HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEE
DRDIPDLSRYRFADRISSFSVPQGWTVRFYEGTDYSGGYYTRSGGEQEATGFNDHIRSIR
CCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHEEE
ILNR
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA