| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238919653
Identifier: 238919653
GI number: 238919653
Start: 1704059
End: 1704217
Strand: Direct
Name: 238919653
Synonym: NT01EI_1754
Alternate gene names: NA
Gene position: 1704059-1704217 (Clockwise)
Preceding gene: 238919651
Following gene: 238919654
Centisome position: 44.7
GC content: 49.69
Gene sequence:
>159_bases GTGGATGCCATCGACTGGCCATGGTTATCGGTGAGCGGTTGTATCACGCCATCACTGCTGGATGGGTTAAAAAACAGGTG CAATCCCGCAGACAGGAAGGATAAAAAGCCTGGTGGGCTGAAAATTGTAATCAAATATCGACAGTGGCCGCTGCATTGA
Upstream 100 bases:
>100_bases CGGCCAGACATAAACTTACCCTGCCCACGTCAGCTTTCAGGAGTGGTGTGATGCCGGAGGGGGAACGGTTCTGGCAGGAT GGATTGCGTGTCTGCGAGGA
Downstream 100 bases:
>100_bases TGGTGCTGGACACCTTCGCTGAAGCTTGGGACAACCAAGATACGCAAGTCAGAACAAGCTGGCACGCCATTGGGTATCTT CAATAGAAAATGTAACTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 52
Protein sequence:
>52_residues MDAIDWPWLSVSGCITPSLLDGLKNRCNPADRKDKKPGGLKIVIKYRQWPLH
Sequences:
>Translated_52_residues MDAIDWPWLSVSGCITPSLLDGLKNRCNPADRKDKKPGGLKIVIKYRQWPLH >Mature_52_residues MDAIDWPWLSVSGCITPSLLDGLKNRCNPADRKDKKPGGLKIVIKYRQWPLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5932; Mature: 5932
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAIDWPWLSVSGCITPSLLDGLKNRCNPADRKDKKPGGLKIVIKYRQWPLH CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCC >Mature Secondary Structure MDAIDWPWLSVSGCITPSLLDGLKNRCNPADRKDKKPGGLKIVIKYRQWPLH CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA