Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919652

Identifier: 238919652

GI number: 238919652

Start: 1703024

End: 1703845

Strand: Reverse

Name: 238919652

Synonym: NT01EI_1753

Alternate gene names: NA

Gene position: 1703845-1703024 (Counterclockwise)

Preceding gene: 238919656

Following gene: 238919650

Centisome position: 44.69

GC content: 57.06

Gene sequence:

>822_bases
ATGGGTCATCTTATCCCCATCGTTTTACCCCCTCATCGCCAGCTGGACAGCGACTTTGACATCCTCGAACACATGGAGCC
GACGACCATCTTCGACAGGGTCACCGACTCCCCTGCCTTTCTCGACGGACTGACAACTGAACCCCATCACATAGGTGAAT
TCCGCAGCACACGCCAACGGGGGATGTCGTACGCGTTTGACTATATCGCTCGCCATACCAATCCACACCGAATCAGGGGC
ATGTTCAGCAATATCCTTAGCCTGTTCTCGGGGGGATCGCTGAATCAGAACTGCGTGATCTGCAGTAAGGCCGTAGAAAA
GAACCTCGCCGCGCTGGAGTGTGGTATGCCCAATGACTTTTGGGTCGCGGGAAGCACCGTGCCGGGGGGGCTGCCGCAAA
ATGTGGCTCCGGAACACTACGTCAGCTTTGCTCTGAAGACCGATCAGCCACTCTCCAGCCAACTGCTGCAGCGCAGTCAG
GAGGGAAGCCGAAACATCATCATGGTAGCGGTTCGGGGCAAAGCCGTTTCCCACGCCATAAACCTGGTACGCACCGATAT
GGGCGCCATCGTGATCGACGGACAGTGCGGATTGCATTACAACCTTAACGCCATCAGGGATAGAGAGCGCTTCGACAAAT
ACTATGGCCCGGGCAAAGGCGTCGTACAGATTTACCAAACCGGCGCCGCGCCCAAGGCGCCCGATATTGACGACAGCGCG
CTGCGGGAGGATTGGGCGGAGGCTGACACGCCTCCAGACGATGACAAGAAGCAGACCTACGACGCAGTCCCTCAGCAGAT
TATCGGGGACTACTTTCGCTAA

Upstream 100 bases:

>100_bases
GCATCATCCCATAATCTCCTCACTTCAGGTGTTGACCGTAGTTACGGATTGCAGCACGGGCGACAGACTGCTACCAGCTA
AGCAACCGGGAGCCTCTGTC

Downstream 100 bases:

>100_bases
CTACGGCGCCCTGTGAAAAAAATGGCTACCCGAGATAGAGCCAGCGCACGACGGTGGGGAGATGCAGATGGGCGATCACC
ATCATCCTTGTTATGTCACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MGHLIPIVLPPHRQLDSDFDILEHMEPTTIFDRVTDSPAFLDGLTTEPHHIGEFRSTRQRGMSYAFDYIARHTNPHRIRG
MFSNILSLFSGGSLNQNCVICSKAVEKNLAALECGMPNDFWVAGSTVPGGLPQNVAPEHYVSFALKTDQPLSSQLLQRSQ
EGSRNIIMVAVRGKAVSHAINLVRTDMGAIVIDGQCGLHYNLNAIRDRERFDKYYGPGKGVVQIYQTGAAPKAPDIDDSA
LREDWAEADTPPDDDKKQTYDAVPQQIIGDYFR

Sequences:

>Translated_273_residues
MGHLIPIVLPPHRQLDSDFDILEHMEPTTIFDRVTDSPAFLDGLTTEPHHIGEFRSTRQRGMSYAFDYIARHTNPHRIRG
MFSNILSLFSGGSLNQNCVICSKAVEKNLAALECGMPNDFWVAGSTVPGGLPQNVAPEHYVSFALKTDQPLSSQLLQRSQ
EGSRNIIMVAVRGKAVSHAINLVRTDMGAIVIDGQCGLHYNLNAIRDRERFDKYYGPGKGVVQIYQTGAAPKAPDIDDSA
LREDWAEADTPPDDDKKQTYDAVPQQIIGDYFR
>Mature_272_residues
GHLIPIVLPPHRQLDSDFDILEHMEPTTIFDRVTDSPAFLDGLTTEPHHIGEFRSTRQRGMSYAFDYIARHTNPHRIRGM
FSNILSLFSGGSLNQNCVICSKAVEKNLAALECGMPNDFWVAGSTVPGGLPQNVAPEHYVSFALKTDQPLSSQLLQRSQE
GSRNIIMVAVRGKAVSHAINLVRTDMGAIVIDGQCGLHYNLNAIRDRERFDKYYGPGKGVVQIYQTGAAPKAPDIDDSAL
REDWAEADTPPDDDKKQTYDAVPQQIIGDYFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30339; Mature: 30207

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHLIPIVLPPHRQLDSDFDILEHMEPTTIFDRVTDSPAFLDGLTTEPHHIGEFRSTRQR
CCCEEEEEECCCHHCCCHHHHHHHCCCHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHH
GMSYAFDYIARHTNPHRIRGMFSNILSLFSGGSLNQNCVICSKAVEKNLAALECGMPNDF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCHHEEECCCCCCE
WVAGSTVPGGLPQNVAPEHYVSFALKTDQPLSSQLLQRSQEGSRNIIMVAVRGKAVSHAI
EEECCCCCCCCCCCCCCHHHEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHH
NLVRTDMGAIVIDGQCGLHYNLNAIRDRERFDKYYGPGKGVVQIYQTGAAPKAPDIDDSA
HHHHHCCCEEEECCCCCCEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHH
LREDWAEADTPPDDDKKQTYDAVPQQIIGDYFR
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GHLIPIVLPPHRQLDSDFDILEHMEPTTIFDRVTDSPAFLDGLTTEPHHIGEFRSTRQR
CCEEEEEECCCHHCCCHHHHHHHCCCHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHH
GMSYAFDYIARHTNPHRIRGMFSNILSLFSGGSLNQNCVICSKAVEKNLAALECGMPNDF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCHHEEECCCCCCE
WVAGSTVPGGLPQNVAPEHYVSFALKTDQPLSSQLLQRSQEGSRNIIMVAVRGKAVSHAI
EEECCCCCCCCCCCCCCHHHEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHH
NLVRTDMGAIVIDGQCGLHYNLNAIRDRERFDKYYGPGKGVVQIYQTGAAPKAPDIDDSA
HHHHHCCCEEEECCCCCCEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHH
LREDWAEADTPPDDDKKQTYDAVPQQIIGDYFR
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA