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The map label for this gene is uspF [H]

Identifier: 238919650

GI number: 238919650

Start: 1701992

End: 1702426

Strand: Reverse

Name: uspF [H]

Synonym: NT01EI_1751

Alternate gene names: 238919650

Gene position: 1702426-1701992 (Counterclockwise)

Preceding gene: 238919652

Following gene: 238919649

Centisome position: 44.66

GC content: 55.4

Gene sequence:

>435_bases
ATGTACAAGACCATTCTGGTTTCCATCGACCTCACTGAAGATAACATATCCAGACTGGTGATCCCGCACGTAGAAACCCT
CGCCAGACTGGAGGACGCTCATATCCATTTCCTGGCCGTGCTGCCGAAGCTGAGCAGTTTTTATGGTATGGAGTCGTTAC
CGGTCGGCCACTATTCGTCAGAAAAGGATCGCCTACAGCATGCCGAGGCTGGACTACAGCAGATGGCCGCCCGGTTTAAC
CTGCCTGATGATCGCACCCACTGTACTATTGCCATCGGCTCGCCGCGCGATTGTATCCTGCTGCTTGCAGAGGAGATCGG
CGCCGATCTTATCATCGTCGCCTCACATCGCCCTGATATTACCACCTATCTATTCGGATCGACGGCCTCTTCGGTCGCAC
GACACGCGTCTACGGCCGTACTGGTCGTCCGCTGA

Upstream 100 bases:

>100_bases
AGGATTAGCTGAGGGGAGCCCAGCGCCCAAAGAGGGAAAGCGGGCTACACTTAACAGGCAGGACCATTACTTTACTTTTG
TCTAAAAAACAGGAGATTGT

Downstream 100 bases:

>100_bases
TCCCTCTCTTCGCGGGTGTCATGCCGGCTTGCCGCTAAGGCCCCCGGCCATCCTCTGCCGCCAGGGGGAATTCCCCCTTG
GCGCAGGGGCGAAAATTTGC

Product: universal stress protein family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MYKTILVSIDLTEDNISRLVIPHVETLARLEDAHIHFLAVLPKLSSFYGMESLPVGHYSSEKDRLQHAEAGLQQMAARFN
LPDDRTHCTIAIGSPRDCILLLAEEIGADLIIVASHRPDITTYLFGSTASSVARHASTAVLVVR

Sequences:

>Translated_144_residues
MYKTILVSIDLTEDNISRLVIPHVETLARLEDAHIHFLAVLPKLSSFYGMESLPVGHYSSEKDRLQHAEAGLQQMAARFN
LPDDRTHCTIAIGSPRDCILLLAEEIGADLIIVASHRPDITTYLFGSTASSVARHASTAVLVVR
>Mature_144_residues
MYKTILVSIDLTEDNISRLVIPHVETLARLEDAHIHFLAVLPKLSSFYGMESLPVGHYSSEKDRLQHAEAGLQQMAARFN
LPDDRTHCTIAIGSPRDCILLLAEEIGADLIIVASHRPDITTYLFGSTASSVARHASTAVLVVR

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI87081893, Length=144, Percent_Identity=45.1388888888889, Blast_Score=128, Evalue=1e-31,
Organism=Escherichia coli, GI1786824, Length=149, Percent_Identity=40.9395973154362, Blast_Score=97, Evalue=4e-22,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 15847; Mature: 15847

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKTILVSIDLTEDNISRLVIPHVETLARLEDAHIHFLAVLPKLSSFYGMESLPVGHYSS
CCEEEEEEEEECCCCCCEEECCCHHHHHHHCCCHHHEEHHHHHHHHHCCCCCCCCCCCCC
EKDRLQHAEAGLQQMAARFNLPDDRTHCTIAIGSPRDCILLLAEEIGADLIIVASHRPDI
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEHHHCCCEEEEECCCCCE
TTYLFGSTASSVARHASTAVLVVR
EEEEECCCHHHHHHHCCEEEEEEC
>Mature Secondary Structure
MYKTILVSIDLTEDNISRLVIPHVETLARLEDAHIHFLAVLPKLSSFYGMESLPVGHYSS
CCEEEEEEEEECCCCCCEEECCCHHHHHHHCCCHHHEEHHHHHHHHHCCCCCCCCCCCCC
EKDRLQHAEAGLQQMAARFNLPDDRTHCTIAIGSPRDCILLLAEEIGADLIIVASHRPDI
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEHHHCCCEEEEECCCCCE
TTYLFGSTASSVARHASTAVLVVR
EEEEECCCHHHHHHHCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]