| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919579
Identifier: 238919579
GI number: 238919579
Start: 1639397
End: 1639534
Strand: Direct
Name: 238919579
Synonym: NT01EI_1678
Alternate gene names: NA
Gene position: 1639397-1639534 (Clockwise)
Preceding gene: 238919577
Following gene: 238919581
Centisome position: 43.0
GC content: 45.65
Gene sequence:
>138_bases TTGGCTGAGCGGATAAACGGTATTCTGAAAAATGCGTTTTTACTCTCAGGCCCAGCGGATCTTGCGCAGGCCAGAACAAT GGTAAAAGAATCTGTAGATATTTATAACCATGAGCGGCCACATCTGGCCCTGAAATAG
Upstream 100 bases:
>100_bases CAGCGGAGTGCAATACTGTTCAGCGCTTTATCAGTCAATACATGAAAGAAACGGGGTAATTGGTTCAAGGACCGATGGTT ATGACTGTTACCAGAATGCG
Downstream 100 bases:
>100_bases AAAACGCCCGATGATGTTCATCAGGCGTTTACAGATAAAAAACTGTCAACCTATATCAGGACTAGTCACTTTTTTCAGCG CTGAATGCTGCGATACAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 45; Mature: 44
Protein sequence:
>45_residues MAERINGILKNAFLLSGPADLAQARTMVKESVDIYNHERPHLALK
Sequences:
>Translated_45_residues MAERINGILKNAFLLSGPADLAQARTMVKESVDIYNHERPHLALK >Mature_44_residues AERINGILKNAFLLSGPADLAQARTMVKESVDIYNHERPHLALK
Specific function: Unknown
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5033; Mature: 4902
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERINGILKNAFLLSGPADLAQARTMVKESVDIYNHERPHLALK CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AERINGILKNAFLLSGPADLAQARTMVKESVDIYNHERPHLALK CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA