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The map label for this gene is dadA

Identifier: 238919536

GI number: 238919536

Start: 1592865

End: 1594118

Strand: Direct

Name: dadA

Synonym: NT01EI_1632

Alternate gene names: 238919536

Gene position: 1592865-1594118 (Clockwise)

Preceding gene: 238919534

Following gene: 238919542

Centisome position: 41.78

GC content: 63.08

Gene sequence:

>1254_bases
ATGCGGGTAGTGATATTGGGAAGCGGTGTGATCGGCGTGACCAGTGCGTGGTATCTGGCGCAGGCTGGTCATCAGGTAAC
GGTGGTCGATCGTCAGGAGGGGCCCGGGCTGGAGACCAGCGCCGCTAACGCCGGACAGATCTCGCCGGGCTATGCGGCGC
CCTGGGCGGCGCCGGGGATCCCGCTTAAGGCGCTGAAATGGCTGTTTCAGCGTCATGCGCCGCTGGCGATGAGTCTGGAT
GGCTCGCTGTTTCAGCTGCGCTGGCTGTGGCAGATGTTACGTAACTGCGACAGCACCCACTATGCCCAAAATAAAGCGCG
GATGGTTCGGCTGGCCGAATACAGTCGTGACTGCCTGGCGCAGCTGCGCCGGACGACGACCATCGATTACGAGGGACGGC
AGCTGGGAACCCTGCAGCTGTTCCGTACGCCGCAGCAGTATGAGAATGCCGCGCGTGATATTGCCGTTCTGCGTGAGGCC
GGGGTGCCTTACCGCCTGTTGCCGACAGCGCAGCTGTCGACGGTAGAGCCGGCGCTGGCGGTGGCAGGTGTGCGCTTGAG
CGGCGGTCTGCATCTGCCTCATGATGAAACCGGGGACTGCCAGCTGTTTACCCGTCATCTGGCGCAGCAGGCGGCGCAGT
CCGGGGTTCATTTTATCTTTAGTACCCAGGTACTGCGGCTACTGCGCAGCGGGGCACGGATACAGGGTGTACAGTGTGGC
CACGATACGCTGGTGGCGGACGCCTATGTGGTCGCGCTGGGAGCCTACTCTACCGGGCTGTTGCAGGATATCGTGGCGAT
CCCGGTCTATCCGCTGAAGGGGTACTCCCTGACACTGCCCATCGACGACCCCGATGCCGCGCCACGCTCGACGGTGTTGG
ATGAGAGCTATAAGGTGGCGATCACCCGCTTCGATCGGCGTATCCGGGTTGGCGGTATGGCCGAGGTGGTCGGCTTTGAC
ATGTCGCTGCCACTGGCTCGGCGTCGTACTCTGGAGAGGGTGGTTCGCGATCTCTATCCGCGCGGCGGATTGTTGCCGCA
GGCGAGCTTTTGGAGTGGTCTGCGTCCGGCGACACCGGACGGTACGCCGCTGGTGGGGGCGACGCCGCTGGAGAATTTGT
ATCTCAATACCGGTCACGGTACGCTGGGATGGACCATGGCCTGCGGCTCCGGGCAGTTGCTGGCGGATATTATCTCCGGC
GTGACGCCGACGATCCGTGTCGACGATCTTTCAGTTTCCCGCTATACCGCGTAA

Upstream 100 bases:

>100_bases
CGTACTGAAAACTGCCGGGTTACCACAGCATGCGCTCCGGTTATTGCATATGCTTGATGTACAGCGTATATGGCATGTGT
GCAGCAGCGGAGAAGCGAAG

Downstream 100 bases:

>100_bases
CGCGGCGGATAGGGCGGACGGGGGATAGTGTGGGCTAGACATCTGCGCGGGAGATGGTCTCATCGCCCCAGTAGAGCTGG
TCCTGATCCGTTTTGGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MRVVILGSGVIGVTSAWYLAQAGHQVTVVDRQEGPGLETSAANAGQISPGYAAPWAAPGIPLKALKWLFQRHAPLAMSLD
GSLFQLRWLWQMLRNCDSTHYAQNKARMVRLAEYSRDCLAQLRRTTTIDYEGRQLGTLQLFRTPQQYENAARDIAVLREA
GVPYRLLPTAQLSTVEPALAVAGVRLSGGLHLPHDETGDCQLFTRHLAQQAAQSGVHFIFSTQVLRLLRSGARIQGVQCG
HDTLVADAYVVALGAYSTGLLQDIVAIPVYPLKGYSLTLPIDDPDAAPRSTVLDESYKVAITRFDRRIRVGGMAEVVGFD
MSLPLARRRTLERVVRDLYPRGGLLPQASFWSGLRPATPDGTPLVGATPLENLYLNTGHGTLGWTMACGSGQLLADIISG
VTPTIRVDDLSVSRYTA

Sequences:

>Translated_417_residues
MRVVILGSGVIGVTSAWYLAQAGHQVTVVDRQEGPGLETSAANAGQISPGYAAPWAAPGIPLKALKWLFQRHAPLAMSLD
GSLFQLRWLWQMLRNCDSTHYAQNKARMVRLAEYSRDCLAQLRRTTTIDYEGRQLGTLQLFRTPQQYENAARDIAVLREA
GVPYRLLPTAQLSTVEPALAVAGVRLSGGLHLPHDETGDCQLFTRHLAQQAAQSGVHFIFSTQVLRLLRSGARIQGVQCG
HDTLVADAYVVALGAYSTGLLQDIVAIPVYPLKGYSLTLPIDDPDAAPRSTVLDESYKVAITRFDRRIRVGGMAEVVGFD
MSLPLARRRTLERVVRDLYPRGGLLPQASFWSGLRPATPDGTPLVGATPLENLYLNTGHGTLGWTMACGSGQLLADIISG
VTPTIRVDDLSVSRYTA
>Mature_417_residues
MRVVILGSGVIGVTSAWYLAQAGHQVTVVDRQEGPGLETSAANAGQISPGYAAPWAAPGIPLKALKWLFQRHAPLAMSLD
GSLFQLRWLWQMLRNCDSTHYAQNKARMVRLAEYSRDCLAQLRRTTTIDYEGRQLGTLQLFRTPQQYENAARDIAVLREA
GVPYRLLPTAQLSTVEPALAVAGVRLSGGLHLPHDETGDCQLFTRHLAQQAAQSGVHFIFSTQVLRLLRSGARIQGVQCG
HDTLVADAYVVALGAYSTGLLQDIVAIPVYPLKGYSLTLPIDDPDAAPRSTVLDESYKVAITRFDRRIRVGGMAEVVGFD
MSLPLARRRTLERVVRDLYPRGGLLPQASFWSGLRPATPDGTPLVGATPLENLYLNTGHGTLGWTMACGSGQLLADIISG
VTPTIRVDDLSVSRYTA

Specific function: Oxidative deamination of D-amino acids

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family

Homologues:

Organism=Escherichia coli, GI1787438, Length=416, Percent_Identity=70.9134615384615, Blast_Score=622, Evalue=1e-179,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DADA_EDWI9 (C5B9W5)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002933051.1
- GeneID:   7961960
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_1632
- OMA:   ELARICM
- ProtClustDB:   CLSK2813108
- HAMAP:   MF_01202
- InterPro:   IPR023080
- InterPro:   IPR006076

Pfam domain/function: PF01266 DAO

EC number: =1.4.99.1

Molecular weight: Translated: 45368; Mature: 45368

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVILGSGVIGVTSAWYLAQAGHQVTVVDRQEGPGLETSAANAGQISPGYAAPWAAPGI
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKALKWLFQRHAPLAMSLDGSLFQLRWLWQMLRNCDSTHYAQNKARMVRLAEYSRDCLA
CHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QLRRTTTIDYEGRQLGTLQLFRTPQQYENAARDIAVLREAGVPYRLLPTAQLSTVEPALA
HHHHHCEECCCCCEECEEHEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHH
VAGVRLSGGLHLPHDETGDCQLFTRHLAQQAAQSGVHFIFSTQVLRLLRSGARIQGVQCG
HCCEEEECCEECCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCEEEEECC
HDTLVADAYVVALGAYSTGLLQDIVAIPVYPLKGYSLTLPIDDPDAAPRSTVLDESYKVA
CCHHHHHHHHEEHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCHHHCCCCCEEE
ITRFDRRIRVGGMAEVVGFDMSLPLARRRTLERVVRDLYPRGGLLPQASFWSGLRPATPD
EEECCCEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCC
GTPLVGATPLENLYLNTGHGTLGWTMACGSGQLLADIISGVTPTIRVDDLSVSRYTA
CCCEECCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MRVVILGSGVIGVTSAWYLAQAGHQVTVVDRQEGPGLETSAANAGQISPGYAAPWAAPGI
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKALKWLFQRHAPLAMSLDGSLFQLRWLWQMLRNCDSTHYAQNKARMVRLAEYSRDCLA
CHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QLRRTTTIDYEGRQLGTLQLFRTPQQYENAARDIAVLREAGVPYRLLPTAQLSTVEPALA
HHHHHCEECCCCCEECEEHEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHH
VAGVRLSGGLHLPHDETGDCQLFTRHLAQQAAQSGVHFIFSTQVLRLLRSGARIQGVQCG
HCCEEEECCEECCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCEEEEECC
HDTLVADAYVVALGAYSTGLLQDIVAIPVYPLKGYSLTLPIDDPDAAPRSTVLDESYKVA
CCHHHHHHHHEEHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCHHHCCCCCEEE
ITRFDRRIRVGGMAEVVGFDMSLPLARRRTLERVVRDLYPRGGLLPQASFWSGLRPATPD
EEECCCEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCC
GTPLVGATPLENLYLNTGHGTLGWTMACGSGQLLADIISGVTPTIRVDDLSVSRYTA
CCCEECCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA