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The map label for this gene is ruvA [H]

Identifier: 238919502

GI number: 238919502

Start: 1559495

End: 1560109

Strand: Direct

Name: ruvA [H]

Synonym: NT01EI_1598

Alternate gene names: 238919502

Gene position: 1559495-1560109 (Clockwise)

Preceding gene: 238919501

Following gene: 238919503

Centisome position: 40.91

GC content: 62.76

Gene sequence:

>615_bases
GTGCGCGTGATTGGTCGCCTCAGAGGTACTATTCTGGAAAAACAGCCGCCGCAGGTGGTGCTGGAAGCCCACGGTGTCGG
GTATGAGGTGCAGATGCCGATGACCTGCTTTTATGAGTTGCCACAGGTCGGCAGTGAAGCGGTGATCTTTACCCACTTTG
TGGTGCGCGAGGATGCCCAGCTGCTGTATGGCTTCAACAATAAGCAGGAGCGTGCGCTGTTTCGTGAACTGATCAAAGTC
AACGGCGTTGGGCCTAAGCTGGCGCTGGCGATCCTGTCCGGGATGTCGGCCCAGCAGTTTGTCACGGCGGTTGAGCGTGA
AGAGGTTGCGGCGCTGGTCAAGCTGCCGGGCGTGGGCAAGAAAACGGCTGAGCGGCTGGTGGTCGAGATGAAGGACCGCT
TCAAGGGGCTGAGCGGCGATCTGTTCACCCCGGCGGATGCGCAGCTGCCGAGTGCCCAGCCTCAGGCTCAGGCGGATGCT
GAGGGCGAGGCGGTTGCCGCGCTGATCGCGCTGGGCTACAAGCCGCAGGAGGCCAGTCGCTTGGTGAACCGGGTGGCGGT
GGCCGGTGCTGACAGTGAAACCCTGATCCGCGACGCGCTGCGCGCTGCGCTGTAA

Upstream 100 bases:

>100_bases
AGAGGGCGGGAGATGCCCGACGCTTTATTACAGGCTGGATATTCATCCAGCCTTTTTTATGGTATAAGCGGAGGCATTAT
TTGACGGAGACAGAGAGGGT

Downstream 100 bases:

>100_bases
TAACCCAGGAGAGCACGGGATGATAGAAGCCGATCGTCTGATTGCCGCCGATGCCCAGAGTGAGGAGGAGTTCCTCGATC
GCGCCATTCGGCCGAAGACA

Product: Holliday junction DNA helicase RuvA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MRVIGRLRGTILEKQPPQVVLEAHGVGYEVQMPMTCFYELPQVGSEAVIFTHFVVREDAQLLYGFNNKQERALFRELIKV
NGVGPKLALAILSGMSAQQFVTAVEREEVAALVKLPGVGKKTAERLVVEMKDRFKGLSGDLFTPADAQLPSAQPQAQADA
EGEAVAALIALGYKPQEASRLVNRVAVAGADSETLIRDALRAAL

Sequences:

>Translated_204_residues
MRVIGRLRGTILEKQPPQVVLEAHGVGYEVQMPMTCFYELPQVGSEAVIFTHFVVREDAQLLYGFNNKQERALFRELIKV
NGVGPKLALAILSGMSAQQFVTAVEREEVAALVKLPGVGKKTAERLVVEMKDRFKGLSGDLFTPADAQLPSAQPQAQADA
EGEAVAALIALGYKPQEASRLVNRVAVAGADSETLIRDALRAAL
>Mature_204_residues
MRVIGRLRGTILEKQPPQVVLEAHGVGYEVQMPMTCFYELPQVGSEAVIFTHFVVREDAQLLYGFNNKQERALFRELIKV
NGVGPKLALAILSGMSAQQFVTAVEREEVAALVKLPGVGKKTAERLVVEMKDRFKGLSGDLFTPADAQLPSAQPQAQADA
EGEAVAALIALGYKPQEASRLVNRVAVAGADSETLIRDALRAAL

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG0632

COG function: function code L; Holliday junction resolvasome, DNA-binding subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvA family [H]

Homologues:

Organism=Escherichia coli, GI1788168, Length=203, Percent_Identity=78.8177339901478, Blast_Score=322, Evalue=1e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011114
- InterPro:   IPR013849
- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000085
- InterPro:   IPR010994 [H]

Pfam domain/function: PF07499 RuvA_C; PF01330 RuvA_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 22084; Mature: 22084

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVIGRLRGTILEKQPPQVVLEAHGVGYEVQMPMTCFYELPQVGSEAVIFTHFVVREDAQ
CCCHHHHHHHHCCCCCCCEEEEECCCCEEEECCHHHHHHHHCCCCCEEEEHHHHHHCCCH
LLYGFNNKQERALFRELIKVNGVGPKLALAILSGMSAQQFVTAVEREEVAALVKLPGVGK
HEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCH
KTAERLVVEMKDRFKGLSGDLFTPADAQLPSAQPQAQADAEGEAVAALIALGYKPQEASR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH
LVNRVAVAGADSETLIRDALRAAL
HHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRVIGRLRGTILEKQPPQVVLEAHGVGYEVQMPMTCFYELPQVGSEAVIFTHFVVREDAQ
CCCHHHHHHHHCCCCCCCEEEEECCCCEEEECCHHHHHHHHCCCCCEEEEHHHHHHCCCH
LLYGFNNKQERALFRELIKVNGVGPKLALAILSGMSAQQFVTAVEREEVAALVKLPGVGK
HEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCH
KTAERLVVEMKDRFKGLSGDLFTPADAQLPSAQPQAQADAEGEAVAALIALGYKPQEASR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH
LVNRVAVAGADSETLIRDALRAAL
HHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA