Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238919432

Identifier: 238919432

GI number: 238919432

Start: 1489669

End: 1490373

Strand: Direct

Name: 238919432

Synonym: NT01EI_1526

Alternate gene names: NA

Gene position: 1489669-1490373 (Clockwise)

Preceding gene: 238919431

Following gene: 238919433

Centisome position: 39.08

GC content: 51.21

Gene sequence:

>705_bases
ATGTACAAGTGGATCCTGCCATTCTTATTTATCATCAATCATGCCTATGCCTTCACCGTTGATTCCATGTTTAAGGTGGA
CAGTGAAAACAGCCGTTACTTTACCTTAAAAAACCCGGATGACGAGCCGGTTTACCTTGCGGTCTCATTAAGCGAATTAC
AGCGTGCGGGGAAGGGGCGTTATCAGGAGAGTGCGCTCTCCCCGGATGATTTTTTAACATGGCCGCTCTATATTGATCCG
ATGGATATCGTTATTGATGCTAAGGGGGAATTACGCGTCTCGGTTATCCGTACCGCTCAAATTACCCCGCACGACCGTAT
TATTGGTGTCAGCTTTATTCCCGACAGTTTACGCCAGCAGGAGCAGGGCGAAAAAAGCAATGTCGCCATCGCCATTGGCT
ATAAGTCGTGGTATCTGATCCCCGGCAGCCAGCGTATTACCGGAGAGCCACAGGCCTGGCTAAGTAACCGGAAGATTCAT
TTCAGTAACCCGACCAATAAGGTATTGCGCCTGATCCTGGATGTCTGCCCGGCCAAAGAAAAGCAAGCCGGCAGTGACGC
CTGCTACAGCGAAGCCATTTTACTCCCCGGCAATGACAAGCAGATCCCCGTCCCGGATGCGGCCGATCTGGAGCGGGGGA
AGGTGACCTTTTTTGACCTTGCTGAGCAGTATAAAAAAGAGATCGCCCTGCGCCCGGCCAGATAA

Upstream 100 bases:

>100_bases
TGATCACGCTTTAATCATTAAATTCTATTTTCAGTCTGTAATGCTATCCGGTGATGAATATATCGCCGGATAATTTGTCG
CTGTCTCCAGGGTGATTTCA

Downstream 100 bases:

>100_bases
GGAAATTACCCATCGTCTGTCAGACAGCAGCCTGCGCTAACGCGCCTGACAGGGTGTCACCCGGCTTGAAGATGAAGATG
ACCATGACGAGTTTCCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MYKWILPFLFIINHAYAFTVDSMFKVDSENSRYFTLKNPDDEPVYLAVSLSELQRAGKGRYQESALSPDDFLTWPLYIDP
MDIVIDAKGELRVSVIRTAQITPHDRIIGVSFIPDSLRQQEQGEKSNVAIAIGYKSWYLIPGSQRITGEPQAWLSNRKIH
FSNPTNKVLRLILDVCPAKEKQAGSDACYSEAILLPGNDKQIPVPDAADLERGKVTFFDLAEQYKKEIALRPAR

Sequences:

>Translated_234_residues
MYKWILPFLFIINHAYAFTVDSMFKVDSENSRYFTLKNPDDEPVYLAVSLSELQRAGKGRYQESALSPDDFLTWPLYIDP
MDIVIDAKGELRVSVIRTAQITPHDRIIGVSFIPDSLRQQEQGEKSNVAIAIGYKSWYLIPGSQRITGEPQAWLSNRKIH
FSNPTNKVLRLILDVCPAKEKQAGSDACYSEAILLPGNDKQIPVPDAADLERGKVTFFDLAEQYKKEIALRPAR
>Mature_234_residues
MYKWILPFLFIINHAYAFTVDSMFKVDSENSRYFTLKNPDDEPVYLAVSLSELQRAGKGRYQESALSPDDFLTWPLYIDP
MDIVIDAKGELRVSVIRTAQITPHDRIIGVSFIPDSLRQQEQGEKSNVAIAIGYKSWYLIPGSQRITGEPQAWLSNRKIH
FSNPTNKVLRLILDVCPAKEKQAGSDACYSEAILLPGNDKQIPVPDAADLERGKVTFFDLAEQYKKEIALRPAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26538; Mature: 26538

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKWILPFLFIINHAYAFTVDSMFKVDSENSRYFTLKNPDDEPVYLAVSLSELQRAGKGR
CCHHHHHHHHHHHHHHEEEECCEEEECCCCCEEEEECCCCCCCEEEEEEHHHHHHHCCCC
YQESALSPDDFLTWPLYIDPMDIVIDAKGELRVSVIRTAQITPHDRIIGVSFIPDSLRQQ
CHHHCCCCCCEEEEEEEECCEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCHHHHHH
EQGEKSNVAIAIGYKSWYLIPGSQRITGEPQAWLSNRKIHFSNPTNKVLRLILDVCPAKE
HCCCCCCEEEEEECCEEEEECCCCCCCCCCHHHHCCCEEEECCCHHHHHHHHHHHCCCCC
KQAGSDACYSEAILLPGNDKQIPVPDAADLERGKVTFFDLAEQYKKEIALRPAR
CCCCCCCHHHCEEEECCCCCEECCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MYKWILPFLFIINHAYAFTVDSMFKVDSENSRYFTLKNPDDEPVYLAVSLSELQRAGKGR
CCHHHHHHHHHHHHHHEEEECCEEEECCCCCEEEEECCCCCCCEEEEEEHHHHHHHCCCC
YQESALSPDDFLTWPLYIDPMDIVIDAKGELRVSVIRTAQITPHDRIIGVSFIPDSLRQQ
CHHHCCCCCCEEEEEEEECCEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCHHHHHH
EQGEKSNVAIAIGYKSWYLIPGSQRITGEPQAWLSNRKIHFSNPTNKVLRLILDVCPAKE
HCCCCCCEEEEEECCEEEEECCCCCCCCCCHHHHCCCEEEECCCHHHHHHHHHHHCCCCC
KQAGSDACYSEAILLPGNDKQIPVPDAADLERGKVTFFDLAEQYKKEIALRPAR
CCCCCCCHHHCEEEECCCCCEECCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1371766 [H]