| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919424
Identifier: 238919424
GI number: 238919424
Start: 1484280
End: 1484720
Strand: Direct
Name: 238919424
Synonym: NT01EI_1518
Alternate gene names: NA
Gene position: 1484280-1484720 (Clockwise)
Preceding gene: 238919423
Following gene: 238919428
Centisome position: 38.93
GC content: 45.12
Gene sequence:
>441_bases ATGAAAAAATACGTTATGGCCTGCGCCCTGACCTTGATATATAACGTTTCATTCGCGGCACCGCTGCAATGCGTTAAAAC CGATCCGGCACAAATCGCTGCGCTATTTGACCAGTGGAATAACTCGCTACAAAGCGGCGATCCTCAAAAGGTCACCGATA ACTATTTAACTGATGCAGTATTACTCCCCACCGTCTCTAGCAAAACCAAGCTGACTCAAGACGATCGCATTACATATTTC AAGCGGTTCCTGGAGAAAAAGCCCCATGGGAAGATAGATAATCGCACGATAAAAATTGGCTGTAATCATGCTATAGACAC AGGAACCTATACCTTCACCTTTGCAGATAACAGTAAAATCTCGGCTCGCTATACATTTACCTATGCTTGGGACGGTAACG CGTGGAAAATATCAACACACCACTCATCGGTGATGCCGTAG
Upstream 100 bases:
>100_bases AAAAACTGGTCTATGCTTAGGTGACCATCCGTTCATGAACGCTGAGTTGTAACTTGATGTTGCTTTAAACGTAACCCATA ATATGAAAGGAGTAACTGTG
Downstream 100 bases:
>100_bases GGCCCTGATCAGCACCGCCCCCTCTTGCCAGTCCATACGGCTGGACTGGCCAGTGGCAGCCACATCTCTATCGATTACCT TGACCAAAATTGGCAGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Kinase; Protein With A Cystatin-Like Fold; Secreted Protein; Exported Protein
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKKYVMACALTLIYNVSFAAPLQCVKTDPAQIAALFDQWNNSLQSGDPQKVTDNYLTDAVLLPTVSSKTKLTQDDRITYF KRFLEKKPHGKIDNRTIKIGCNHAIDTGTYTFTFADNSKISARYTFTYAWDGNAWKISTHHSSVMP
Sequences:
>Translated_146_residues MKKYVMACALTLIYNVSFAAPLQCVKTDPAQIAALFDQWNNSLQSGDPQKVTDNYLTDAVLLPTVSSKTKLTQDDRITYF KRFLEKKPHGKIDNRTIKIGCNHAIDTGTYTFTFADNSKISARYTFTYAWDGNAWKISTHHSSVMP >Mature_146_residues MKKYVMACALTLIYNVSFAAPLQCVKTDPAQIAALFDQWNNSLQSGDPQKVTDNYLTDAVLLPTVSSKTKLTQDDRITYF KRFLEKKPHGKIDNRTIKIGCNHAIDTGTYTFTFADNSKISARYTFTYAWDGNAWKISTHHSSVMP
Specific function: Unknown
COG id: COG4875
COG function: function code S; Uncharacterized protein conserved in bacteria with a cystatin-like fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16493; Mature: 16493
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYVMACALTLIYNVSFAAPLQCVKTDPAQIAALFDQWNNSLQSGDPQKVTDNYLTDAV CCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEE LLPTVSSKTKLTQDDRITYFKRFLEKKPHGKIDNRTIKIGCNHAIDTGTYTFTFADNSKI EECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCEE SARYTFTYAWDGNAWKISTHHSSVMP EEEEEEEEEECCCEEEEECCCCCCCC >Mature Secondary Structure MKKYVMACALTLIYNVSFAAPLQCVKTDPAQIAALFDQWNNSLQSGDPQKVTDNYLTDAV CCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEE LLPTVSSKTKLTQDDRITYFKRFLEKKPHGKIDNRTIKIGCNHAIDTGTYTFTFADNSKI EECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCEE SARYTFTYAWDGNAWKISTHHSSVMP EEEEEEEEEECCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA