| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919339
Identifier: 238919339
GI number: 238919339
Start: 1411716
End: 1411991
Strand: Direct
Name: 238919339
Synonym: NT01EI_1431
Alternate gene names: NA
Gene position: 1411716-1411991 (Clockwise)
Preceding gene: 238919336
Following gene: 238919342
Centisome position: 37.03
GC content: 54.35
Gene sequence:
>276_bases ATGCAAGTAATACTGGATCAGGATAGCTTTTATTCGTGGTTCAATCAGGCGTTTTTATTTGACAGTAAAACTATGCTGGG CGTATGGGTCTCCGAGAGCGAGATGCGCCGTCTGGCTGACACTATGGCGCCACAGCGCTATCCGTGCCTTGCCATGATGA TCCCGGGCTCACCCCATGTCGACTCTCCGCGGGCCGTTTACGTTTATCGTGAGCAGATAGCCGATTGGCTGGAGCAGCTC TCCGGTCAGGAGAGCTGCACTTTTGCCGGGAGGTGA
Upstream 100 bases:
>100_bases TTCATTCTGTGAATATGTTTCCGGCAGCGCGTAGGGACTCGCCCAGGGTATTGGCGCGAGGATAACGGATTCCAATCTGG ATGGTAATAAAGTGAGTACA
Downstream 100 bases:
>100_bases GTCGCGTAGGACCGGCAAAAGTGCCGACGGCGTGCTCTCCGTCCCCGCTGCAACGCGGACGGAGAGCCGTATGGCATAAG TCTCAATGAAGATATTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MQVILDQDSFYSWFNQAFLFDSKTMLGVWVSESEMRRLADTMAPQRYPCLAMMIPGSPHVDSPRAVYVYREQIADWLEQL SGQESCTFAGR
Sequences:
>Translated_91_residues MQVILDQDSFYSWFNQAFLFDSKTMLGVWVSESEMRRLADTMAPQRYPCLAMMIPGSPHVDSPRAVYVYREQIADWLEQL SGQESCTFAGR >Mature_91_residues MQVILDQDSFYSWFNQAFLFDSKTMLGVWVSESEMRRLADTMAPQRYPCLAMMIPGSPHVDSPRAVYVYREQIADWLEQL SGQESCTFAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10533; Mature: 10533
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVILDQDSFYSWFNQAFLFDSKTMLGVWVSESEMRRLADTMAPQRYPCLAMMIPGSPHV CEEEECCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCCC DSPRAVYVYREQIADWLEQLSGQESCTFAGR CCCCEEEEEHHHHHHHHHHHCCCCCEECCCC >Mature Secondary Structure MQVILDQDSFYSWFNQAFLFDSKTMLGVWVSESEMRRLADTMAPQRYPCLAMMIPGSPHV CEEEECCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCCC DSPRAVYVYREQIADWLEQLSGQESCTFAGR CCCCEEEEEHHHHHHHHHHHCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA