| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is ycbX [C]
Identifier: 238919336
GI number: 238919336
Start: 1409326
End: 1409919
Strand: Direct
Name: ycbX [C]
Synonym: NT01EI_1428
Alternate gene names: 238919336
Gene position: 1409326-1409919 (Clockwise)
Preceding gene: 238919335
Following gene: 238919339
Centisome position: 36.97
GC content: 61.45
Gene sequence:
>594_bases ATGACCCTGATCAGCGTTGACAGCGGCGTTACGCTGGCCATATCCATGCGGAGGATGCTGGCCGATCGGCAATGGCCGAT GAGATTATTTTTACCGTCAGTGCCAGATGACGCAGGATCGGGTGAACTACAGCAGATCCTGCGTGCGCATCCGCCTTTGC GCGTGATTACGGCGGTGTCCCACCCCGACTGGGTGGCAGGGGGGCGTGGGGCGCTTCGATGCCGTTCGCGTCACGCTGTT TCCTGCGCTGGCGCAGCGTCATGTCTATGGCGCTGCGGGCGTTATGGCGCAGGTGCAAACGCTGCCGCTGGGTTGCCCGC AGAGCCGTGGTATCAAGAGCATTTCGGCGAAGCCGTGCGCAGCGGTAATCGTACCTATCGTTTGGTGCAGATACGTATCA ATGGCAATGCGTTCAGGGGGAATAATCAGGCGTCGGTGCCACTACAGGCGGAGAGCGCCGGTGTCAGAATGGCCTGTAGC TGCAGGGCGGGCGTGTACGGCAACGGTAAGGTGCTGCTTAACGCCGTTCGGTTGAACAGCCTCGGCGCCGGTGAGGCGAC AACTGGCCTGCTGTGCGATACCGCAGGAGGATAG
Upstream 100 bases:
>100_bases CCGTATCGAGCTGGCTCCACCGTCATATGCGCGCGGGGCAGCCGCTCTGTGCCGCGGTGCCGGAAGGGGCCTTTTCCCTC GATCGCCGCCCGCGGGTCCG
Downstream 100 bases:
>100_bases TGTTATCGGGGCGTAATGGCACAGGAGCCCATCGTCATGGGCTCCTCTCTTTGATTCTCGATCCGGCTGCTCAGGTCGGG GCCGTCATCGCTATTGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTLISVDSGVTLAISMRRMLADRQWPMRLFLPSVPDDAGSGELQQILRAHPPLRVITAVSHPDWVAGGRGALRCRSRHAV SCAGAASCLWRCGRYGAGANAAAGLPAEPWYQEHFGEAVRSGNRTYRLVQIRINGNAFRGNNQASVPLQAESAGVRMACS CRAGVYGNGKVLLNAVRLNSLGAGEATTGLLCDTAGG
Sequences:
>Translated_197_residues MTLISVDSGVTLAISMRRMLADRQWPMRLFLPSVPDDAGSGELQQILRAHPPLRVITAVSHPDWVAGGRGALRCRSRHAV SCAGAASCLWRCGRYGAGANAAAGLPAEPWYQEHFGEAVRSGNRTYRLVQIRINGNAFRGNNQASVPLQAESAGVRMACS CRAGVYGNGKVLLNAVRLNSLGAGEATTGLLCDTAGG >Mature_196_residues TLISVDSGVTLAISMRRMLADRQWPMRLFLPSVPDDAGSGELQQILRAHPPLRVITAVSHPDWVAGGRGALRCRSRHAVS CAGAASCLWRCGRYGAGANAAAGLPAEPWYQEHFGEAVRSGNRTYRLVQIRINGNAFRGNNQASVPLQAESAGVRMACSC RAGVYGNGKVLLNAVRLNSLGAGEATTGLLCDTAGG
Specific function: Unknown
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20802; Mature: 20671
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLISVDSGVTLAISMRRMLADRQWPMRLFLPSVPDDAGSGELQQILRAHPPLRVITAVS CEEEEECCCCEEEHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEEC HPDWVAGGRGALRCRSRHAVSCAGAASCLWRCGRYGAGANAAAGLPAEPWYQEHFGEAVR CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH SGNRTYRLVQIRINGNAFRGNNQASVPLQAESAGVRMACSCRAGVYGNGKVLLNAVRLNS CCCCEEEEEEEEECCEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCEEEEEEEEECC LGAGEATTGLLCDTAGG CCCCCCCCCEEEECCCC >Mature Secondary Structure TLISVDSGVTLAISMRRMLADRQWPMRLFLPSVPDDAGSGELQQILRAHPPLRVITAVS EEEEECCCCEEEHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEEC HPDWVAGGRGALRCRSRHAVSCAGAASCLWRCGRYGAGANAAAGLPAEPWYQEHFGEAVR CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH SGNRTYRLVQIRINGNAFRGNNQASVPLQAESAGVRMACSCRAGVYGNGKVLLNAVRLNS CCCCEEEEEEEEECCEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCEEEEEEEEECC LGAGEATTGLLCDTAGG CCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA