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The map label for this gene is ycbW [H]

Identifier: 238919287

GI number: 238919287

Start: 1365802

End: 1366359

Strand: Direct

Name: ycbW [H]

Synonym: NT01EI_1377

Alternate gene names: 238919287

Gene position: 1365802-1366359 (Clockwise)

Preceding gene: 238919286

Following gene: 238919288

Centisome position: 35.83

GC content: 58.96

Gene sequence:

>558_bases
ATGAATATAAAGCCCGGAGATCGCTGGTGCTGGTTTTTTGATCGGCAGCACGATCGTCTGATGTTGGATCTGGCGAATGG
CATGGTCTTCCGCTCCCGCTTTCCCTCTAAAATGCTGACGCCAGATGCCTTTGATGCCAGTAGCTTTTGTGTCGATGATG
CCGCAAGCTACTACCATTTTGCCGAGCGCTGTCAGGCGAGTGGGCTGGATACGGCGCAGTGTGCCGAGCTGGTATTGAAT
GCCCTGGTTGCGCAGCGCTTCCTGAAACCGATAATGCCAAAAAGCTGGTACTTTACGCCGCAGCCGGGTCGCTATGTGCC
TGAGATGGGAGAGCTGGTCGGTGTGCAGCTGCTCGATACGCCCGACTGGGGACGCCTGCTGGTGATTGCGCCGGGCGCCA
GTGCCAGCCTGTGTCTGTTGGCCCAGCCCTCGCTGGCGCTGGCCGGTAAGCGGCTGATGCTGGGAGAGGCAATCAAGGTG
ATGCATGACCGTTTGCTGCCGCTGAGTACGCATCCGGAGACGCTGTCTGACGACACCACGCTGGCCTGCGCAGGATAA

Upstream 100 bases:

>100_bases
TATTTGCTCAGATGCTGAGTTAATCGCGTACCGTCGCGTGACATTGCTTGGCAGTATCGTTATGTTGCCATGGATTTTTA
TGGCGTGGGGGGGTCAATGC

Downstream 100 bases:

>100_bases
CCCTTTACCGCTGCCTCTCTTCGATGTACTTCGGTGCACCACGCGCATGCCGCGTTTTATGGCGATGTTTAGGTAATAAT
CTGAAAATCGCTCTATTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MNIKPGDRWCWFFDRQHDRLMLDLANGMVFRSRFPSKMLTPDAFDASSFCVDDAASYYHFAERCQASGLDTAQCAELVLN
ALVAQRFLKPIMPKSWYFTPQPGRYVPEMGELVGVQLLDTPDWGRLLVIAPGASASLCLLAQPSLALAGKRLMLGEAIKV
MHDRLLPLSTHPETLSDDTTLACAG

Sequences:

>Translated_185_residues
MNIKPGDRWCWFFDRQHDRLMLDLANGMVFRSRFPSKMLTPDAFDASSFCVDDAASYYHFAERCQASGLDTAQCAELVLN
ALVAQRFLKPIMPKSWYFTPQPGRYVPEMGELVGVQLLDTPDWGRLLVIAPGASASLCLLAQPSLALAGKRLMLGEAIKV
MHDRLLPLSTHPETLSDDTTLACAG
>Mature_185_residues
MNIKPGDRWCWFFDRQHDRLMLDLANGMVFRSRFPSKMLTPDAFDASSFCVDDAASYYHFAERCQASGLDTAQCAELVLN
ALVAQRFLKPIMPKSWYFTPQPGRYVPEMGELVGVQLLDTPDWGRLLVIAPGASASLCLLAQPSLALAGKRLMLGEAIKV
MHDRLLPLSTHPETLSDDTTLACAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081807, Length=167, Percent_Identity=57.4850299401198, Blast_Score=198, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009809 [H]

Pfam domain/function: PF07126 DUF1379 [H]

EC number: NA

Molecular weight: Translated: 20522; Mature: 20522

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKPGDRWCWFFDRQHDRLMLDLANGMVFRSRFPSKMLTPDAFDASSFCVDDAASYYHF
CCCCCCCEEEEEEECCCCEEEEEHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
AERCQASGLDTAQCAELVLNALVAQRFLKPIMPKSWYFTPQPGRYVPEMGELVGVQLLDT
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHCEEEECC
PDWGRLLVIAPGASASLCLLAQPSLALAGKRLMLGEAIKVMHDRLLPLSTHPETLSDDTT
CCCCEEEEEECCCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
LACAG
EEECC
>Mature Secondary Structure
MNIKPGDRWCWFFDRQHDRLMLDLANGMVFRSRFPSKMLTPDAFDASSFCVDDAASYYHF
CCCCCCCEEEEEEECCCCEEEEEHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
AERCQASGLDTAQCAELVLNALVAQRFLKPIMPKSWYFTPQPGRYVPEMGELVGVQLLDT
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHCEEEECC
PDWGRLLVIAPGASASLCLLAQPSLALAGKRLMLGEAIKVMHDRLLPLSTHPETLSDDTT
CCCCEEEEEECCCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
LACAG
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]