| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is flhE [H]
Identifier: 238919252
GI number: 238919252
Start: 1330950
End: 1331354
Strand: Direct
Name: flhE [H]
Synonym: NT01EI_1342
Alternate gene names: 238919252
Gene position: 1330950-1331354 (Clockwise)
Preceding gene: 238919251
Following gene: 238919256
Centisome position: 34.91
GC content: 61.48
Gene sequence:
>405_bases ATGAAGCGATTGCTCTGTCTGGCTATTCTGCTGGCGCCATGGGCAGTACAGGCCAACGGTGGCAGCTGGTCTGCGGACGG TAATGGCCGGATCCTGAGTCAGAAGGGGATGGTCAGTAACCAGCCCCCGCTGGCCCCACCGCCGGGGGAGGTACCTCCGG CGGCCGCGATTGATGACGTGGTGTGGCAGATAACCCTGCTGAGCCCGGCGCCGGACGGACTGAATCTACAGCTGTGCAGC GCACGGCGCTGCATGGCGCTGGATGGTCTGTCCGGCCGTTCTGCCGGATTAAACGGTGAGAGCGCTGCTGTGCCGCTGCG ACTGATGCTGTGGATAGCGGGGAAGGGGACAATCTACCCGCCGATCAACGTTGTCAGCCAGCAGGTTATCGTTAATTATC ATTAA
Upstream 100 bases:
>100_bases ACTGCCGCAGCTGGTGGTGCTCTCCAATCTGGAGATCAGCGACAACCGCCAGATCCGTATGACCTCAACGATCGGTGGCG TGGAGTCAGGAGCATAATAC
Downstream 100 bases:
>100_bases TATTGTTATAAATACGACGCCAATATCAGACGCCCGGCATTCTGTGCCCTGTTCAGGGCACAGCCTGGCATTGGCCAAAA GGGTCTGCGTTAAACACGCA
Product: flagellar protein FlhE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKRLLCLAILLAPWAVQANGGSWSADGNGRILSQKGMVSNQPPLAPPPGEVPPAAAIDDVVWQITLLSPAPDGLNLQLCS ARRCMALDGLSGRSAGLNGESAAVPLRLMLWIAGKGTIYPPINVVSQQVIVNYH
Sequences:
>Translated_134_residues MKRLLCLAILLAPWAVQANGGSWSADGNGRILSQKGMVSNQPPLAPPPGEVPPAAAIDDVVWQITLLSPAPDGLNLQLCS ARRCMALDGLSGRSAGLNGESAAVPLRLMLWIAGKGTIYPPINVVSQQVIVNYH >Mature_134_residues MKRLLCLAILLAPWAVQANGGSWSADGNGRILSQKGMVSNQPPLAPPPGEVPPAAAIDDVVWQITLLSPAPDGLNLQLCS ARRCMALDGLSGRSAGLNGESAAVPLRLMLWIAGKGTIYPPINVVSQQVIVNYH
Specific function: Not essential for flagellar formation and function [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788186, Length=120, Percent_Identity=37.5, Blast_Score=80, Evalue=5e-17,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009420 [H]
Pfam domain/function: PF06366 FlhE [H]
EC number: NA
Molecular weight: Translated: 14060; Mature: 14060
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLCLAILLAPWAVQANGGSWSADGNGRILSQKGMVSNQPPLAPPPGEVPPAAAIDDV CCHHHHHHHHHCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHCCE VWQITLLSPAPDGLNLQLCSARRCMALDGLSGRSAGLNGESAAVPLRLMLWIAGKGTIYP EEEEEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC PINVVSQQVIVNYH CHHHCCEEEEEECC >Mature Secondary Structure MKRLLCLAILLAPWAVQANGGSWSADGNGRILSQKGMVSNQPPLAPPPGEVPPAAAIDDV CCHHHHHHHHHCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHCCE VWQITLLSPAPDGLNLQLCSARRCMALDGLSGRSAGLNGESAAVPLRLMLWIAGKGTIYP EEEEEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC PINVVSQQVIVNYH CHHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA