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The map label for this gene is napC [H]

Identifier: 238919150

GI number: 238919150

Start: 1217463

End: 1218083

Strand: Direct

Name: napC [H]

Synonym: NT01EI_1221

Alternate gene names: 238919150

Gene position: 1217463-1218083 (Clockwise)

Preceding gene: 238919149

Following gene: 238919152

Centisome position: 31.94

GC content: 57.97

Gene sequence:

>621_bases
ATGATGAGCGAGCAACATAACGCCCCGACGGGCAACAAGCCGGGCCTGCTGCGCCGGGTGTGGCAGTGGTGGCGTCGTCC
CAGTCGTCTGGCGATCGGCACGCTGCTGCTGCTGGGATTCGTCGCCGGTATCCTGTTCTGGAGCGGCTTCAACACCGGGC
TGGAAAAGGCCAACACCGAGCAGTTCTGCCTCAGCTGTCATGAGATGCGCGACAACGTTTACCAGGAGTATCTGGAGACG
GCGCATTACTCCAACCGCAGCGGCGTGCGCGCCACCTGCCCGGACTGCCATGTGCCCCATGAGTTTGTGCCGAAGATGAT
CCGCAAGATCAAGGCCAGCAAGGAGCTGTATGGCAAGGTGTTCGGGGTTATCGATACGCCACAGAAGTTTGAGGCACATC
GTTTGCAGATGGCGGAAAACGAATGGGCGCGTATGAAGGCCAACAACTCCCAGGAGTGTCGTAACTGTCATAATTTCGAC
AATATGGACTTCAGCCAGCAGAAGACGGTGGCGGCGAAGATGCACGATCAGGCGATCCGCGATAACAAGACCTGCATCGA
CTGCCATAAGGGCATCGCCCATAAGCTGCCGGAGATGAAAGGGATCCCGACCGGTTATTAA

Upstream 100 bases:

>100_bases
CTACTTCTGCCTGCAGTGCCACGTACCGCAGACCGATGCACCGCCGATCGTCGGGAATACCTTTACCCCGTCCAGCGGCT
TTGGTCAGTAAAAGGGGCCT

Downstream 100 bases:

>100_bases
TCTACAGACGCTGTTGCGGTAAAAACATAATGCGCCGAGAGGCGCATTATGTTTATCCGCTATCGATGCGTGCTAGCGTT
TATCCTCAGCTCGCCGCGGT

Product: cytochrome c-type protein NapC

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MMSEQHNAPTGNKPGLLRRVWQWWRRPSRLAIGTLLLLGFVAGILFWSGFNTGLEKANTEQFCLSCHEMRDNVYQEYLET
AHYSNRSGVRATCPDCHVPHEFVPKMIRKIKASKELYGKVFGVIDTPQKFEAHRLQMAENEWARMKANNSQECRNCHNFD
NMDFSQQKTVAAKMHDQAIRDNKTCIDCHKGIAHKLPEMKGIPTGY

Sequences:

>Translated_206_residues
MMSEQHNAPTGNKPGLLRRVWQWWRRPSRLAIGTLLLLGFVAGILFWSGFNTGLEKANTEQFCLSCHEMRDNVYQEYLET
AHYSNRSGVRATCPDCHVPHEFVPKMIRKIKASKELYGKVFGVIDTPQKFEAHRLQMAENEWARMKANNSQECRNCHNFD
NMDFSQQKTVAAKMHDQAIRDNKTCIDCHKGIAHKLPEMKGIPTGY
>Mature_206_residues
MMSEQHNAPTGNKPGLLRRVWQWWRRPSRLAIGTLLLLGFVAGILFWSGFNTGLEKANTEQFCLSCHEMRDNVYQEYLET
AHYSNRSGVRATCPDCHVPHEFVPKMIRKIKASKELYGKVFGVIDTPQKFEAHRLQMAENEWARMKANNSQECRNCHNFD
NMDFSQQKTVAAKMHDQAIRDNKTCIDCHKGIAHKLPEMKGIPTGY

Specific function: Mediates electron flow from quinones to the NapAB complex [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=194, Percent_Identity=77.8350515463918, Blast_Score=348, Evalue=2e-97,
Organism=Escherichia coli, GI1787230, Length=186, Percent_Identity=48.3870967741936, Blast_Score=186, Evalue=8e-49,
Organism=Escherichia coli, GI1788181, Length=148, Percent_Identity=50.6756756756757, Blast_Score=160, Evalue=6e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR005126
- InterPro:   IPR011885 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 23756; Mature: 23756

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSEQHNAPTGNKPGLLRRVWQWWRRPSRLAIGTLLLLGFVAGILFWSGFNTGLEKANTE
CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHH
QFCLSCHEMRDNVYQEYLETAHYSNRSGVRATCPDCHVPHEFVPKMIRKIKASKELYGKV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FGVIDTPQKFEAHRLQMAENEWARMKANNSQECRNCHNFDNMDFSQQKTVAAKMHDQAIR
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
DNKTCIDCHKGIAHKLPEMKGIPTGY
CCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMSEQHNAPTGNKPGLLRRVWQWWRRPSRLAIGTLLLLGFVAGILFWSGFNTGLEKANTE
CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHH
QFCLSCHEMRDNVYQEYLETAHYSNRSGVRATCPDCHVPHEFVPKMIRKIKASKELYGKV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FGVIDTPQKFEAHRLQMAENEWARMKANNSQECRNCHNFDNMDFSQQKTVAAKMHDQAIR
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
DNKTCIDCHKGIAHKLPEMKGIPTGY
CCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]